DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Aspergillus niger ATCC 1015
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; Aspergillus
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
e_gw1_1.1110 a5 SF
  a5 PF
e_gw1_16.512 a5 SF
  a5 PF
fge1_pg_C_4000667 a5 SF
  a5 PF
e_gw1_6.695 a5 SF
  a5 PF
fge1_pg_C_2000168 a5 SF
  a5 PF
est_fge1_pg_C_80499 a5 SF
  a5 PF
fge1_pg_C_2000697 a5 SF
  a5 PF
est_fge1_pg_C_90054 a5 SF
  a5 PF
e_gw1_1.1129 a5 SF
  a5 PF
gw1_5.81 a5 SF
  a5 PF
e_gw1_12.39 a5 SF
  a5 PF
gw1_9.719 a5 SF
  a5 PF
gw1_17.423 a5 SF
  a5 PF
e_gw1_1.1831 a5 SF
  a5 PF
fge1_pg_C_4000330 a5 SF
  a5 PF
fge1_pm_C_6000246 a5 SF
  a5 PF
e_gw1_4.142 a5 SF
  a5 PF
gw1_10.247 a5 SF
  a5 PF
e_gw1_4.342 a5 SF
  a5 PF
e_gw1_10.578 a5 SF
  a5 PF
e_gw1_9.502 a5 SF
  a5 PF
e_gw1_11.110 a5 SF
  a5 PF
est_fge1_pg_C_180127 a5 SF
  a5 PF
e_gw1_4.316 a5 SF
  a5 PF
fge1_pg_C_1000990 a5 SF
  a5 PF
e_gw1_12.662 a5 SF
  a5 PF
fge1_pg_C_11000161 a5 SF
  a5 PF
e_gw1_6.707 a5 SF
  a5 PF
est_fge1_pg_C_10935 a5 SF
  a5 PF
e_gw1_8.562 a5 SF
  a5 PF
e_gw1_11.51 a5 SF
  a5 PF
fge1_pg_C_1000982 a5 SF
  a5 PF
fge1_pg_C_14000263 a5 SF
  a5 PF
e_gw1_7.797 a5 SF
  a5 PF
est_GWPlus_C_32309 a5 SF
  a5 PF
gw1_1.1249 a5 SF
  a5 PF
gw1_14.101 a5 SF
  a5 PF
est_fge1_pm_C_40296 a5 SF
  a5 PF
fge1_pg_C_2000560 a5 SF
  a5 PF
fge1_pg_C_8000237 a5 SF
  a5 PF
fge1_pm_C_8000079 a5 SF
  a5 PF
fge1_pg_C_2000720 a5 SF
  a5 PF
fge1_pg_C_16000009 a5 SF
  a5 PF
e_gw1_3.215 a5 SF
  a5 PF
e_gw1_2.1338 a5 SF
  a5 PF
gw1_2.270 a5 SF
  a5 PF
e_gw1_10.501 a5 SF
  a5 PF
e_gw1_13.132 a5 SF
  a5 PF
e_gw1_7.92 a5 SF
  a5 PF
gw1_7.128 a5 SF
  a5 PF