DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Aureococcus anophagefferens
Taxonomy: Eukaryota; stramenopiles; Pelagophyceae; Aureococcus
source (downloaded: 2007-10-02)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Auran1|62392 External link a6 SF
  a6 PF
jgi|Auran1|64934 External link a6 SF
  a6 PF
jgi|Auran1|55090 External link a6 SF
  a6 PF
jgi|Auran1|64192 External link a6 SF
  a6 PF
jgi|Auran1|71972 External link a6 SF
  a6 PF
jgi|Auran1|63880 External link a6 SF
  a6 PF
jgi|Auran1|61124 External link a6 SF
  a6 PF
jgi|Auran1|60508 External link a6 SF
  a6 PF
jgi|Auran1|71709 External link a6 SF
  a6 PF
jgi|Auran1|31391 External link a6 SF
  a6 PF
jgi|Auran1|20811 External link a6 SF
  a6 PF
jgi|Auran1|66686 External link a6 SF
  a6 PF
jgi|Auran1|60742 External link a6 SF
  a6 PF
jgi|Auran1|71426 External link a6 SF
  a6 PF
jgi|Auran1|72578 External link a6 SF
  a6 PF
jgi|Auran1|64731 External link a6 SF
  a6 PF
jgi|Auran1|61875 External link a6 SF
  a6 PF No hits
jgi|Auran1|68521 External link a6 SF
  a6 PF No hits
jgi|Auran1|68847 External link a6 SF
  a6 PF No hits
jgi|Auran1|62759 External link a6 SF
  a6 PF
jgi|Auran1|61562 External link a6 SF
  a6 PF No hits
jgi|Auran1|68594 External link a6 SF
  a6 PF No hits
jgi|Auran1|34120 External link a6 SF
  a6 PF
jgi|Auran1|33571 External link a6 SF
  a6 PF
jgi|Auran1|60583 External link a6 SF
  a6 PF
jgi|Auran1|70898 External link a6 SF
  a6 PF
jgi|Auran1|61106 External link a6 SF
  a6 PF
jgi|Auran1|65958 External link a6 SF
  a6 PF
jgi|Auran1|65631 External link a6 SF
  a6 PF
jgi|Auran1|65820 External link a6 SF
  a6 PF
jgi|Auran1|61070 External link a6 SF
  a6 PF
jgi|Auran1|72835 External link a6 SF
  a6 PF
jgi|Auran1|64076 External link a6 SF
  a6 PF
jgi|Auran1|62693 External link a6 SF
  a6 PF
jgi|Auran1|16921 External link a6 SF
  a6 PF
jgi|Auran1|18065 External link a6 SF
  a6 PF No hits
jgi|Auran1|63985 External link a6 SF
  a6 PF
jgi|Auran1|63164 External link a6 SF
  a6 PF
jgi|Auran1|69586 External link a6 SF
  a6 PF
jgi|Auran1|38626 External link a6 SF
  a6 PF
jgi|Auran1|61000 External link a6 SF
  a6 PF
jgi|Auran1|71062 External link a6 SF
  a6 PF
jgi|Auran1|9244 External link a6 SF
  a6 PF
jgi|Auran1|25037 External link a6 SF
  a6 PF
jgi|Auran1|66020 External link a6 SF
  a6 PF
jgi|Auran1|66461 External link a6 SF
  a6 PF
jgi|Auran1|9250 External link a6 SF
  a6 PF
jgi|Auran1|61446 External link a6 SF
  a6 PF
jgi|Auran1|23476 External link a6 SF
  a6 PF
jgi|Auran1|63810 External link a6 SF
  a6 PF No hits