DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Aspergillus oryzae RIB40
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; Aspergillus
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AO090005000165 a8 SF
  a8 PF
AO090701000011 a8 SF
  a8 PF
AO090009000621 a8 SF
  a8 PF
AO090005000676 a8 SF
  a8 PF
AO090026000719 a8 SF
  a8 PF
AO090012000768 a8 SF
  a8 PF
AO090009000502 a8 SF
  a8 PF
AO090120000398 a8 SF
  a8 PF
AO090026000315 a8 SF
  a8 PF
AO090012000002 a8 SF
  a8 PF
AO090011000264 a8 SF
  a8 PF
AO090005000990 a8 SF
  a8 PF
AO090701000629 a8 SF
  a8 PF
AO090005000179 a8 SF
  a8 PF
AO090003001362 a8 SF
  a8 PF
AO090023000362 a8 SF
  a8 PF
AO090012000882 a8 SF
  a8 PF
AO090023000416 a8 SF
  a8 PF No hits
AO090038000494 a8 SF
  a8 PF
AO090001000515 a8 SF
  a8 PF
AO090012000792 a8 SF
  a8 PF
AO090010000233 a8 SF
  a8 PF
AO090023000120 a8 SF
  a8 PF
AO090001000633 a8 SF
  a8 PF
AO090038000557 a8 SF
  a8 PF
AO090701000881 a8 SF
  a8 PF
AO090001000703 a8 SF
  a8 PF
AO090009000133 a8 SF
  a8 PF
AO090103000009 a8 SF
  a8 PF
AO090005001282 a8 SF
  a8 PF
AO090113000035 a8 SF
  a8 PF
AO090005000121 a8 SF
  a8 PF
AO090102000449 a8 SF
  a8 PF
AO090001000321 a8 SF
  a8 PF
AO090011000944 a8 SF
  a8 PF
AO090023000280 a8 SF
  a8 PF
AO090011000890 a8 SF
  a8 PF
AO090103000027 a8 SF
  a8 PF
AO090010000240 a8 SF
  a8 PF
AO090010000762 a8 SF
  a8 PF
AO090113000097 a8 SF
  a8 PF
AO090011000183 a8 SF
  a8 PF
AO090010000113 a8 SF
  a8 PF
AO090020000043 a8 SF
  a8 PF
AO090102000029 a8 SF
  a8 PF
AO090003001292 a8 SF
  a8 PF
AO090102000477 a8 SF
  a8 PF
AO090001000645 a8 SF
  a8 PF
AO090113000164 a8 SF
  a8 PF
AO090010000338 a8 SF
  a8 PF