DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Anopheles gambiae 49_3j (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AGAP007782-PA External link ah SF
  ah PF
AGAP007783-PA External link ah SF
  ah PF
AGAP000431-PA External link ah SF
  ah PF
AGAP004050-PC External link ah SF
  ah PF
AGAP001388-PA External link ah SF
  ah PF
AGAP004905-PA External link ah SF
  ah PF
AGAP006428-PA External link ah SF
  ah PF
AGAP000029-PA External link ah SF
  ah PF
AGAP007617-PA External link ah SF
  ah PF
AGAP006133-PA External link ah SF
  ah PF
AGAP005031-PA External link ah SF
  ah PF
AGAP009088-PA External link ah SF
  ah PF
AGAP006536-PA External link ah SF
  ah PF
AGAP011134-PA External link ah SF
  ah PF
AGAP006537-PA External link ah SF
  ah PF
AGAP005138-PA External link ah SF
  ah PF
AGAP006540-PA External link ah SF
  ah PF
AGAP002236-PA External link ah SF
  ah PF
AGAP002235-PA External link ah SF
  ah PF
AGAP004228-PA External link ah SF
  ah PF
AGAP011759-PA External link ah SF
  ah PF
AGAP011181-PA External link ah SF
  ah PF
AGAP005484-PA External link ah SF
  ah PF
AGAP009120-PA External link ah SF
  ah PF
AGAP009130-PA External link ah SF
  ah PF
AGAP005483-PA External link ah SF
  ah PF
AGAP007956-PA External link ah SF
  ah PF
AGAP009096-PA External link ah SF
  ah PF
AGAP002918-PA External link ah SF
  ah PF
AGAP003364-PA External link ah SF
  ah PF
AGAP009068-PA External link ah SF
  ah PF
AGAP004634-PA External link ah SF
  ah PF
AGAP006758-PA External link ah SF
  ah PF
AGAP005481-PA External link ah SF
  ah PF
AGAP010500-PA External link ah SF
  ah PF
AGAP004764-PA External link ah SF
  ah PF
AGAP003942-PA External link ah SF
  ah PF
AGAP011403-PA External link ah SF
  ah PF
AGAP004285-PA External link ah SF
  ah PF
AGAP011877-PA External link ah SF
  ah PF
AGAP004259-PA External link ah SF
  ah PF
AGAP004729-PA External link ah SF
  ah PF
AGAP007513-PA External link ah SF
  ah PF
AGAP011405-PA External link ah SF
  ah PF
AGAP007804-PA External link ah SF
  ah PF
AGAP012741-PA External link ah SF
  ah PF
AGAP011674-PA External link ah SF
  ah PF
AGAP005479-PA External link ah SF
  ah PF
AGAP005348-PA External link ah SF
  ah PF
AGAP012223-PA External link ah SF
  ah PF