DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Aedes aegypti 49_1b (all transcripts)
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Aedes; Stegomyia
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AAEL000623-PA External link ax SF
  ax PF
AAEL000631-PA External link ax SF
  ax PF
AAEL004696-PA External link ax SF
  ax PF
AAEL009114-PA External link ax SF
  ax PF
AAEL015099-PB External link ax SF
  ax PF
AAEL015099-PD External link ax SF
  ax PF
AAEL015099-PI External link ax SF
  ax PF
AAEL015099-PG External link ax SF
  ax PF
AAEL015099-PF External link ax SF
  ax PF
AAEL015099-PH External link ax SF
  ax PF
AAEL015099-PE External link ax SF
  ax PF
AAEL015099-PC External link ax SF
  ax PF
AAEL015099-PJ External link ax SF
  ax PF
AAEL013408-PA External link ax SF
  ax PF
AAEL013408-PB External link ax SF
  ax PF
AAEL009416-PA External link ax SF
  ax PF
AAEL010031-PA External link ax SF
  ax PF
AAEL001554-PA External link ax SF
  ax PF
AAEL015015-PA External link ax SF
  ax PF
AAEL000172-PA External link ax SF
  ax PF
AAEL001636-PA External link ax SF
  ax PF
AAEL015099-PA External link ax SF
  ax PF
AAEL005031-PA External link ax SF
  ax PF
AAEL007974-PA External link ax SF
  ax PF
AAEL005020-PA External link ax SF
  ax PF
AAEL007120-PA External link ax SF
  ax PF
AAEL001380-PA External link ax SF
  ax PF
AAEL008685-PA External link ax SF
  ax PF
AAEL013763-PA External link ax SF
  ax PF
AAEL013168-PA External link ax SF
  ax PF
AAEL011247-PA External link ax SF
  ax PF
AAEL010744-PA External link ax SF
  ax PF
AAEL007205-PA External link ax SF
  ax PF
AAEL010221-PA External link ax SF
  ax PF
AAEL010224-PA External link ax SF
  ax PF
AAEL010222-PA External link ax SF
  ax PF
AAEL007980-PA External link ax SF
  ax PF
AAEL010501-PA External link ax SF
  ax PF
AAEL001996-PA External link ax SF
  ax PF
AAEL008721-PA External link ax SF
  ax PF
AAEL011316-PA External link ax SF
  ax PF
AAEL015293-PA External link ax SF
  ax PF
AAEL002514-PA External link ax SF
  ax PF
AAEL005074-PA External link ax SF
  ax PF
AAEL006986-PA External link ax SF
  ax PF
AAEL000980-PA External link ax SF
  ax PF
AAEL013022-PA External link ax SF
  ax PF
AAEL011805-PA External link ax SF
  ax PF
AAEL003529-PA External link ax SF
  ax PF
AAEL003456-PA External link ax SF
  ax PF