DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Cryptococcus neoformans JEC21
Taxonomy: Eukaryota; Fungi; Basidiomycota; Hymenomycetes; Heterobasidiomycetes; Tremellomycetidae; Tremellales; Tremellaceae; Filobasidiella
source (downloaded: 2005-09-08)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
177.m03070 External link cf SF
  cf PF
177.m02919 External link cf SF
  cf PF
181.m07956 External link cf SF
  cf PF
179.m00544 External link cf SF
  cf PF
186.m03449 External link cf SF
  cf PF
185.m02648 External link cf SF
  cf PF
181.m08252 External link cf SF
  cf PF No hits
177.m03032 External link cf SF
  cf PF
162.m03594 External link cf SF
  cf PF
162.m02828 External link cf SF
  cf PF
181.m08864 External link cf SF
  cf PF
167.m05777 External link cf SF
  cf PF
163.m06383 External link cf SF
  cf PF No hits
186.m04068 External link cf SF
  cf PF
183.m01592 External link cf SF
  cf PF
167.m03651 External link cf SF
  cf PF
162.m02858 External link cf SF
  cf PF
164.m02141 External link cf SF
  cf PF No hits
179.m00700 External link cf SF
  cf PF
177.m03223 External link cf SF
  cf PF
186.m04100 External link cf SF
  cf PF
164.m02193 External link cf SF
  cf PF
181.m08733 External link cf SF
  cf PF
181.m08814 External link cf SF
  cf PF
186.m03949 External link cf SF
  cf PF
185.m02606 External link cf SF
  cf PF
183.m01643 External link cf SF
  cf PF
176.m02421 External link cf SF
  cf PF
164.m01533 External link cf SF
  cf PF
163.m03793 External link cf SF
  cf PF
186.m03933 External link cf SF
  cf PF
181.m08669 External link cf SF
  cf PF
177.m03004 External link cf SF
  cf PF
177.m03084 External link cf SF
  cf PF
185.m02661 External link cf SF
  cf PF
180.m00312 External link cf SF
  cf PF
185.m02374 External link cf SF
  cf PF
177.m03408 External link cf SF
  cf PF
186.m04016 External link cf SF
  cf PF
179.m00030 External link cf SF
  cf PF
164.m02811 External link cf SF
  cf PF
181.m08552 External link cf SF
  cf PF
185.m02378 External link cf SF
  cf PF
164.m02116 External link cf SF
  cf PF
186.m03830 External link cf SF
  cf PF
186.m03497 External link cf SF
  cf PF
163.m06170 External link cf SF
  cf PF
179.m00240 External link cf SF
  cf PF
162.m02999 External link cf SF
  cf PF
163.m03788 External link cf SF
  cf PF