DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Drosophila melanogaster Ensembl 49_54 (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
source (downloaded: 2008-03-21)

A curated set of 753 Drosophila melanogaster TFs is available at www.FlyTF.org.

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
FBpp0089223 External link de SF
  de PF
FBpp0079451 External link de SF
  de PF
FBpp0084820 External link de SF
  de PF
FBpp0081256 External link de SF
  de PF
FBpp0073599 External link de SF
  de PF
FBpp0083410 External link de SF
  de PF
FBpp0074651 External link de SF
  de PF
FBpp0082081 External link de SF
  de PF
FBpp0071337 External link de SF
  de PF
FBpp0088092 External link de SF
  de PF
FBpp0072421 External link de SF
  de PF
FBpp0080265 External link de SF
  de PF
FBpp0072214 External link de SF
  de PF
FBpp0087651 External link de SF
  de PF
FBpp0073014 External link de SF
  de PF
FBpp0085394 External link de SF
  de PF
FBpp0071216 External link de SF
  de PF
FBpp0080712 External link de SF
  de PF
FBpp0075740 External link de SF
  de PF
FBpp0075685 External link de SF
  de PF
FBpp0079583 External link de SF
  de PF
FBpp0081304 External link de SF
  de PF
FBpp0082675 External link de SF
  de PF
FBpp0111583 External link de SF
  de PF
FBpp0075533 External link de SF
  de PF
FBpp0076725 External link de SF
  de PF No hits
FBpp0070465 External link de SF
  de PF
FBpp0081551 External link de SF
  de PF
FBpp0077132 External link de SF
  de PF
FBpp0112062 External link de SF
  de PF
FBpp0073236 External link de SF
  de PF
FBpp0084206 External link de SF
  de PF
FBpp0083240 External link de SF
  de PF
FBpp0076724 External link de SF
  de PF
FBpp0082593 External link de SF
  de PF
FBpp0072021 External link de SF
  de PF
FBpp0083250 External link de SF
  de PF
FBpp0076707 External link de SF
  de PF
FBpp0080387 External link de SF
  de PF
FBpp0081844 External link de SF
  de PF
FBpp0081428 External link de SF
  de PF
FBpp0081337 External link de SF
  de PF
FBpp0081985 External link de SF
  de PF
FBpp0081395 External link de SF
  de PF
FBpp0075529 External link de SF
  de PF
FBpp0078048 External link de SF
  de PF
FBpp0070466 External link de SF
  de PF
FBpp0081893 External link de SF
  de PF
FBpp0081831 External link de SF
  de PF
FBpp0081396 External link de SF
  de PF