DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Canis familiaris 49_2g (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSCAFP00000002531 External link di SF
  di PF
ENSCAFP00000003304 External link di SF
  di PF
ENSCAFP00000014321 External link di SF
  di PF
ENSCAFP00000028266 External link di SF
  di PF
ENSCAFP00000002446 External link di SF
  di PF
ENSCAFP00000025313 External link di SF
  di PF No hits
ENSCAFP00000002924 External link di SF
  di PF
ENSCAFP00000007422 External link di SF
  di PF
ENSCAFP00000033473 External link di SF
  di PF No hits
ENSCAFP00000002919 External link di SF
  di PF
ENSCAFP00000011413 External link di SF
  di PF
ENSCAFP00000030461 External link di SF
  di PF
ENSCAFP00000031903 External link di SF
  di PF
ENSCAFP00000012342 External link di SF
  di PF
ENSCAFP00000015791 External link di SF
  di PF
ENSCAFP00000015760 External link di SF
  di PF
ENSCAFP00000015724 External link di SF
  di PF
ENSCAFP00000009831 External link di SF
  di PF
ENSCAFP00000015767 External link di SF
  di PF
ENSCAFP00000017230 External link di SF
  di PF
ENSCAFP00000019166 External link di SF
  di PF
ENSCAFP00000013658 External link di SF
  di PF
ENSCAFP00000027430 External link di SF
  di PF
ENSCAFP00000001573 External link di SF
  di PF
ENSCAFP00000012283 External link di SF
  di PF
ENSCAFP00000001585 External link di SF
  di PF
ENSCAFP00000028407 External link di SF
  di PF
ENSCAFP00000017006 External link di SF
  di PF
ENSCAFP00000024678 External link di SF
  di PF
ENSCAFP00000020119 External link di SF
  di PF
ENSCAFP00000002702 External link di SF
  di PF
ENSCAFP00000025741 External link di SF
  di PF
ENSCAFP00000028253 External link di SF
  di PF
ENSCAFP00000025956 External link di SF
  di PF
ENSCAFP00000016672 External link di SF
  di PF
ENSCAFP00000029999 External link di SF
  di PF
ENSCAFP00000029148 External link di SF
  di PF
ENSCAFP00000029157 External link di SF
  di PF
ENSCAFP00000016688 External link di SF
  di PF
ENSCAFP00000026343 External link di SF
  di PF
ENSCAFP00000030256 External link di SF
  di PF
ENSCAFP00000013426 External link di SF
  di PF
ENSCAFP00000030074 External link di SF
  di PF
ENSCAFP00000029908 External link di SF
  di PF
ENSCAFP00000022898 External link di SF
  di PF
ENSCAFP00000007467 External link di SF
  di PF
ENSCAFP00000030680 External link di SF
  di PF
ENSCAFP00000018678 External link di SF
  di PF
ENSCAFP00000011776 External link di SF
  di PF
ENSCAFP00000006152 External link di SF
  di PF