DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Echinops telfairi 49_1e (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tenrecidae; Tenrecinae; Echinops
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSETEP00000010115 External link e3 SF
  e3 PF
ENSETEP00000004217 External link e3 SF
  e3 PF
ENSETEP00000015977 External link e3 SF
  e3 PF
ENSETEP00000004402 External link e3 SF
  e3 PF
ENSETEP00000007725 External link e3 SF
  e3 PF
ENSETEP00000004921 External link e3 SF
  e3 PF
ENSETEP00000014314 External link e3 SF
  e3 PF
ENSETEP00000001537 External link e3 SF
  e3 PF
ENSETEP00000000627 External link e3 SF
  e3 PF
ENSETEP00000010981 External link e3 SF
  e3 PF
ENSETEP00000011702 External link e3 SF
  e3 PF
ENSETEP00000011293 External link e3 SF
  e3 PF
ENSETEP00000014608 External link e3 SF
  e3 PF
ENSETEP00000002030 External link e3 SF
  e3 PF
ENSETEP00000010402 External link e3 SF
  e3 PF
ENSETEP00000008008 External link e3 SF
  e3 PF
ENSETEP00000001152 External link e3 SF
  e3 PF
ENSETEP00000015589 External link e3 SF
  e3 PF
ENSETEP00000009384 External link e3 SF
  e3 PF
ENSETEP00000008130 External link e3 SF
  e3 PF
ENSETEP00000010252 External link e3 SF
  e3 PF
ENSETEP00000004498 External link e3 SF
  e3 PF
ENSETEP00000007982 External link e3 SF
  e3 PF
ENSETEP00000015901 External link e3 SF
  e3 PF
ENSETEP00000015086 External link e3 SF
  e3 PF
ENSETEP00000001350 External link e3 SF
  e3 PF
ENSETEP00000004492 External link e3 SF
  e3 PF
ENSETEP00000014137 External link e3 SF
  e3 PF
ENSETEP00000009030 External link e3 SF
  e3 PF
ENSETEP00000009287 External link e3 SF
  e3 PF
ENSETEP00000000326 External link e3 SF
  e3 PF
ENSETEP00000001200 External link e3 SF
  e3 PF
ENSETEP00000012784 External link e3 SF
  e3 PF
ENSETEP00000011038 External link e3 SF
  e3 PF
ENSETEP00000000294 External link e3 SF
  e3 PF
ENSETEP00000009949 External link e3 SF
  e3 PF
ENSETEP00000003114 External link e3 SF
  e3 PF
ENSETEP00000008092 External link e3 SF
  e3 PF
ENSETEP00000012190 External link e3 SF
  e3 PF
ENSETEP00000014722 External link e3 SF
  e3 PF
ENSETEP00000001227 External link e3 SF
  e3 PF
ENSETEP00000002898 External link e3 SF
  e3 PF
ENSETEP00000015782 External link e3 SF
  e3 PF
ENSETEP00000005412 External link e3 SF
  e3 PF
ENSETEP00000001619 External link e3 SF
  e3 PF
ENSETEP00000011140 External link e3 SF
  e3 PF
ENSETEP00000013596 External link e3 SF
  e3 PF
ENSETEP00000013510 External link e3 SF
  e3 PF
ENSETEP00000015292 External link e3 SF
  e3 PF
ENSETEP00000000203 External link e3 SF
  e3 PF