DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Leishmania major 100505
Taxonomy: Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmania
source (downloaded: 2005-09-08)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
LmjF22.0060 External link em SF
  em PF
LmjF32.3070 External link em SF
  em PF
LmjF30.3490 External link em SF
  em PF
LmjF30.3510 External link em SF
  em PF
LmjF35.3970 External link em SF
  em PF
LmjF36.3200 External link em SF
  em PF
LmjF36.6990 External link em SF
  em PF
LmjF14.1150 External link em SF
  em PF
LmjF31.1340 External link em SF
  em PF
LmjF31.1330 External link em SF
  em PF No hits
LmjF28.0825 External link em SF
  em PF
LmjF19.0190 External link em SF
  em PF
LmjF17.0710 External link em SF
  em PF
LmjF36.6530 External link em SF
  em PF
LmjF25.2190 External link em SF
  em PF
LmjF36.6930 External link em SF No hits
  em PF
LmjF21.0800 External link em SF No hits
  em PF
LmjF30.0260 External link em SF No hits
  em PF
LmjF29.2520 External link em SF No hits
  em PF
LmjF14.1140 External link em SF No hits
  em PF
LmjF29.0600 External link em SF No hits
  em PF
LmjF30.2340 External link em SF No hits
  em PF
LmjF14.0420 External link em SF No hits
  em PF
LmjF01.0800 External link em SF No hits
  em PF
LmjF29.0610 External link em SF No hits
  em PF
LmjF07.1070 External link em SF No hits
  em PF
LmjF30.2250 External link em SF No hits
  em PF