DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Equus caballus 49_2 (all transcripts)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSECAP00000011921 External link eq SF
  eq PF
ENSECAP00000015185 External link eq SF
  eq PF
ENSECAP00000020624 External link eq SF
  eq PF
ENSECAP00000012409 External link eq SF
  eq PF
ENSECAP00000003259 External link eq SF
  eq PF
ENSECAP00000007116 External link eq SF
  eq PF
ENSECAP00000019711 External link eq SF
  eq PF
ENSECAP00000010777 External link eq SF
  eq PF
ENSECAP00000008313 External link eq SF
  eq PF
ENSECAP00000006312 External link eq SF
  eq PF
ENSECAP00000016945 External link eq SF
  eq PF
ENSECAP00000007883 External link eq SF
  eq PF
ENSECAP00000017130 External link eq SF
  eq PF
ENSECAP00000004865 External link eq SF
  eq PF
ENSECAP00000006191 External link eq SF
  eq PF
ENSECAP00000022405 External link eq SF
  eq PF
ENSECAP00000022419 External link eq SF
  eq PF
ENSECAP00000007916 External link eq SF
  eq PF
ENSECAP00000022420 External link eq SF
  eq PF
ENSECAP00000017752 External link eq SF
  eq PF
ENSECAP00000022258 External link eq SF
  eq PF
ENSECAP00000002525 External link eq SF
  eq PF
ENSECAP00000019363 External link eq SF
  eq PF
ENSECAP00000006453 External link eq SF
  eq PF
ENSECAP00000015444 External link eq SF
  eq PF
ENSECAP00000016564 External link eq SF
  eq PF
ENSECAP00000018855 External link eq SF
  eq PF
ENSECAP00000016488 External link eq SF
  eq PF
ENSECAP00000003071 External link eq SF
  eq PF
ENSECAP00000014611 External link eq SF
  eq PF
ENSECAP00000019485 External link eq SF
  eq PF
ENSECAP00000006798 External link eq SF
  eq PF
ENSECAP00000007318 External link eq SF
  eq PF
ENSECAP00000016414 External link eq SF
  eq PF
ENSECAP00000007242 External link eq SF
  eq PF
ENSECAP00000000187 External link eq SF
  eq PF
ENSECAP00000008395 External link eq SF
  eq PF
ENSECAP00000014453 External link eq SF
  eq PF
ENSECAP00000022063 External link eq SF
  eq PF
ENSECAP00000017814 External link eq SF
  eq PF
ENSECAP00000006517 External link eq SF
  eq PF
ENSECAP00000020643 External link eq SF
  eq PF
ENSECAP00000014486 External link eq SF
  eq PF
ENSECAP00000007606 External link eq SF
  eq PF
ENSECAP00000022018 External link eq SF
  eq PF
ENSECAP00000022037 External link eq SF
  eq PF
ENSECAP00000009675 External link eq SF
  eq PF
ENSECAP00000017026 External link eq SF
  eq PF
ENSECAP00000000018 External link eq SF
  eq PF
ENSECAP00000021896 External link eq SF
  eq PF