DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Plasmodium berghei ANKA
Taxonomy: Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Vinckeia)
source (downloaded: 2007-07-20)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
PB001060.02.0 External link fb SF
  fb PF
PB000307.00.0 External link fb SF
  fb PF
PB000687.01.0 External link fb SF
  fb PF
PB000683.01.0 External link fb SF
  fb PF
PB000182.02.0 External link fb SF
  fb PF No hits
PB301336.00.0 External link fb SF
  fb PF No hits
PB000721.03.0 External link fb SF
  fb PF No hits
PB000932.00.0 External link fb SF
  fb PF
PB000088.03.0 External link fb SF
  fb PF
PB001418.02.0 External link fb SF
  fb PF
PB000366.00.0 External link fb SF
  fb PF
PB000278.02.0 External link fb SF
  fb PF
PB000479.02.0 External link fb SF
  fb PF
PB000868.00.0 External link fb SF No hits
  fb PF
PB000517.00.0 External link fb SF No hits
  fb PF
PB000851.01.0 External link fb SF No hits
  fb PF
PB001157.01.0 External link fb SF No hits
  fb PF
PB001158.02.0 External link fb SF No hits
  fb PF
PB301383.00.0 External link fb SF No hits
  fb PF