DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Felis catus 49_1c (all transcripts)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSFCAP00000001492 External link fe SF
  fe PF
ENSFCAP00000008802 External link fe SF
  fe PF No hits
ENSFCAP00000006003 External link fe SF
  fe PF
ENSFCAP00000013676 External link fe SF
  fe PF
ENSFCAP00000004585 External link fe SF
  fe PF
ENSFCAP00000002319 External link fe SF
  fe PF
ENSFCAP00000002318 External link fe SF
  fe PF
ENSFCAP00000008274 External link fe SF
  fe PF
ENSFCAP00000007029 External link fe SF
  fe PF
ENSFCAP00000001362 External link fe SF
  fe PF
ENSFCAP00000004411 External link fe SF
  fe PF
ENSFCAP00000002982 External link fe SF
  fe PF
ENSFCAP00000011441 External link fe SF
  fe PF
ENSFCAP00000004636 External link fe SF
  fe PF
ENSFCAP00000005818 External link fe SF
  fe PF
ENSFCAP00000001788 External link fe SF
  fe PF
ENSFCAP00000012150 External link fe SF
  fe PF
ENSFCAP00000007322 External link fe SF
  fe PF
ENSFCAP00000006652 External link fe SF
  fe PF
ENSFCAP00000004685 External link fe SF
  fe PF
ENSFCAP00000009994 External link fe SF
  fe PF
ENSFCAP00000012031 External link fe SF
  fe PF
ENSFCAP00000004712 External link fe SF
  fe PF
ENSFCAP00000001680 External link fe SF
  fe PF
ENSFCAP00000013945 External link fe SF
  fe PF
ENSFCAP00000000983 External link fe SF
  fe PF
ENSFCAP00000005720 External link fe SF
  fe PF
ENSFCAP00000010127 External link fe SF
  fe PF
ENSFCAP00000000932 External link fe SF
  fe PF
ENSFCAP00000008908 External link fe SF
  fe PF
ENSFCAP00000008323 External link fe SF
  fe PF
ENSFCAP00000011962 External link fe SF
  fe PF
ENSFCAP00000007992 External link fe SF
  fe PF
ENSFCAP00000000790 External link fe SF
  fe PF
ENSFCAP00000005790 External link fe SF
  fe PF
ENSFCAP00000013912 External link fe SF
  fe PF
ENSFCAP00000006476 External link fe SF
  fe PF
ENSFCAP00000011691 External link fe SF
  fe PF
ENSFCAP00000000473 External link fe SF
  fe PF
ENSFCAP00000010673 External link fe SF
  fe PF
ENSFCAP00000002327 External link fe SF
  fe PF
ENSFCAP00000013910 External link fe SF
  fe PF
ENSFCAP00000009659 External link fe SF
  fe PF
ENSFCAP00000005109 External link fe SF
  fe PF
ENSFCAP00000010857 External link fe SF
  fe PF
ENSFCAP00000012651 External link fe SF
  fe PF
ENSFCAP00000005662 External link fe SF
  fe PF
ENSFCAP00000008463 External link fe SF
  fe PF
ENSFCAP00000011489 External link fe SF
  fe PF
ENSFCAP00000000461 External link fe SF
  fe PF