DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Fusarium oxysporum f. sp. lycopersici 4286
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; mitosporic Hypocreales; Fusarium; Fusarium oxysporum complex
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
FOXG_06107 fo SF
  fo PF
FOXG_03428 fo SF
  fo PF
FOXG_03227 fo SF
  fo PF
FOXG_06266 fo SF
  fo PF
FOXG_14975 fo SF
  fo PF
FOXG_09939 fo SF
  fo PF
FOXG_09938 fo SF
  fo PF
FOXG_03165 fo SF
  fo PF
FOXG_05342 fo SF
  fo PF
FOXG_01787 fo SF
  fo PF No hits
FOXG_07573 fo SF
  fo PF
FOXG_14257 fo SF
  fo PF
FOXG_13116 fo SF
  fo PF
FOXG_05667 fo SF
  fo PF
FOXG_16650 fo SF
  fo PF
FOXG_08872 fo SF
  fo PF
FOXG_05805 fo SF
  fo PF
FOXG_13496 fo SF
  fo PF
FOXG_08830 fo SF
  fo PF
FOXG_11808 fo SF
  fo PF
FOXG_17233 fo SF
  fo PF
FOXG_02659 fo SF
  fo PF
FOXG_08561 fo SF
  fo PF
FOXG_00942 fo SF
  fo PF
FOXG_16959 fo SF
  fo PF
FOXG_16654 fo SF
  fo PF
FOXG_05575 fo SF
  fo PF
FOXG_09684 fo SF
  fo PF
FOXG_00068 fo SF
  fo PF
FOXG_02820 fo SF
  fo PF
FOXG_17135 fo SF
  fo PF
FOXG_09892 fo SF
  fo PF
FOXG_02655 fo SF
  fo PF
FOXG_17662 fo SF
  fo PF
FOXG_01330 fo SF
  fo PF
FOXG_12298 fo SF
  fo PF
FOXG_15074 fo SF
  fo PF
FOXG_04427 fo SF
  fo PF
FOXG_17458 fo SF
  fo PF
FOXG_14407 fo SF
  fo PF
FOXG_11942 fo SF
  fo PF
FOXG_03831 fo SF
  fo PF
FOXG_06157 fo SF
  fo PF
FOXG_03748 fo SF
  fo PF
FOXG_02014 fo SF
  fo PF
FOXG_00317 fo SF
  fo PF
FOXG_10123 fo SF
  fo PF
FOXG_13684 fo SF
  fo PF
FOXG_14341 fo SF
  fo PF
FOXG_00219 fo SF
  fo PF