DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Fusarium verticillioides 7600
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Gibberella
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
FVEG_02301 fv SF
  fv PF
FVEG_04118 fv SF
  fv PF
FVEG_08160 fv SF
  fv PF No hits
FVEG_08570 fv SF
  fv PF
FVEG_02033 fv SF
  fv PF
FVEG_08569 fv SF
  fv PF
FVEG_11861 fv SF
  fv PF
FVEG_04507 fv SF
  fv PF
FVEG_02704 fv SF
  fv PF
FVEG_04314 fv SF
  fv PF
FVEG_11865 fv SF
  fv PF
FVEG_03700 fv SF
  fv PF
FVEG_08094 fv SF
  fv PF
FVEG_06107 fv SF
  fv PF
FVEG_12420 fv SF
  fv PF
FVEG_04788 fv SF
  fv PF
FVEG_11090 fv SF
  fv PF
FVEG_00066 fv SF
  fv PF
FVEG_12958 fv SF
  fv PF
FVEG_11163 fv SF
  fv PF
FVEG_13323 fv SF
  fv PF No hits
FVEG_09146 fv SF
  fv PF
FVEG_13844 fv SF
  fv PF
FVEG_12532 fv SF
  fv PF
FVEG_03514 fv SF
  fv PF
FVEG_11995 fv SF
  fv PF
FVEG_05057 fv SF
  fv PF
FVEG_01035 fv SF
  fv PF
FVEG_00005 fv SF
  fv PF
FVEG_13591 fv SF
  fv PF
FVEG_08195 fv SF
  fv PF
FVEG_03391 fv SF
  fv PF
FVEG_01303 fv SF
  fv PF
FVEG_11353 fv SF
  fv PF
FVEG_09315 fv SF
  fv PF
FVEG_11887 fv SF
  fv PF
FVEG_07022 fv SF
  fv PF
FVEG_00153 fv SF
  fv PF
FVEG_07971 fv SF
  fv PF
FVEG_13258 fv SF
  fv PF
FVEG_04228 fv SF
  fv PF
FVEG_08457 fv SF
  fv PF
FVEG_05357 fv SF
  fv PF
FVEG_02315 fv SF
  fv PF
FVEG_12536 fv SF
  fv PF
FVEG_10799 fv SF
  fv PF
FVEG_10069 fv SF
  fv PF
FVEG_08358 fv SF
  fv PF
FVEG_08754 fv SF
  fv PF
FVEG_05647 fv SF
  fv PF