DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Plasmodium chabaudi
Taxonomy: Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodium; Plasmodium (Vinckeia)
source (downloaded: 2007-07-20)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
PC000733.02.0 External link fy SF
  fy PF
PC000431.02.0 External link fy SF
  fy PF
PC300600.00.0 External link fy SF
  fy PF
PC000051.01.0 External link fy SF
  fy PF
PC000659.01.0 External link fy SF
  fy PF
PC000710.02.0 External link fy SF
  fy PF
PC000815.00.0 External link fy SF
  fy PF
PC000852.01.0 External link fy SF
  fy PF
PC000100.05.0 External link fy SF
  fy PF
PC000598.02.0 External link fy SF
  fy PF
PC302012.00.0 External link fy SF No hits
  fy PF
PC301763.00.0 External link fy SF No hits
  fy PF
PC302276.00.0 External link fy SF No hits
  fy PF
PC000071.04.0 External link fy SF No hits
  fy PF
PC000078.04.0 External link fy SF No hits
  fy PF
PC000452.03.0 External link fy SF No hits
  fy PF
PC302651.00.0 External link fy SF No hits
  fy PF
PC302379.00.0 External link fy SF No hits
  fy PF
PC000174.03.0 External link fy SF No hits
  fy PF