DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Ashbya gossypii 1.0
Taxonomy: Eukaryota; Fungi; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
source (downloaded: 2004-07-07)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ADL213W External link go SF
  go PF
AAR121W External link go SF
  go PF
AEL295C External link go SF
  go PF
ABR058C External link go SF
  go PF
ADR249W External link go SF
  go PF
AAR174W External link go SF
  go PF
AFR513C External link go SF
  go PF
AFR237W External link go SF
  go PF
AFR069C External link go SF
  go PF
AER088C External link go SF
  go PF
AFR081C External link go SF
  go PF
AFL031W External link go SF
  go PF
AER183C External link go SF
  go PF
ACL058W External link go SF
  go PF
AGL083W External link go SF
  go PF
ACR241C External link go SF
  go PF
AFR096W External link go SF
  go PF
AFR117C External link go SF
  go PF
AGL091W External link go SF
  go PF
ACL195C External link go SF
  go PF
AFL160C External link go SF
  go PF
AFR722C External link go SF
  go PF
AAL057C External link go SF
  go PF
ABR174W External link go SF
  go PF
AGL099C External link go SF
  go PF
AGR280C External link go SF
  go PF
ACL093C External link go SF
  go PF
AAL175W External link go SF
  go PF
AGL206C External link go SF
  go PF
AFR171W External link go SF
  go PF
ADR404C External link go SF
  go PF
ADR403C External link go SF
  go PF
ADR199C External link go SF
  go PF
AGL233C External link go SF
  go PF
ADR365W External link go SF
  go PF
AGR061C External link go SF
  go PF
AFL200W External link go SF
  go PF
AER291C External link go SF
  go PF
AGR369W External link go SF
  go PF
AFL033W External link go SF
  go PF
AGL361C External link go SF
  go PF
ACR107W External link go SF
  go PF
ADR375W External link go SF
  go PF
ACL096W External link go SF
  go PF
ABL099W External link go SF
  go PF
ABL121C External link go SF
  go PF
ADR405C External link go SF
  go PF
AER153W External link go SF
  go PF
AER370W External link go SF
  go PF
ACR028C External link go SF
  go PF