DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Schizosaccharomyces japonicus yFS275
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
SJAG_00727 hj SF
  hj PF
SJAG_00802 hj SF
  hj PF
SJAG_01694 hj SF
  hj PF
SJAG_02752 hj SF
  hj PF
SJAG_00792 hj SF
  hj PF
SJAG_04249 hj SF
  hj PF
SJAG_03183 hj SF
  hj PF
SJAG_02730 hj SF
  hj PF
SJAG_01740 hj SF
  hj PF
SJAG_00664 hj SF
  hj PF
SJAG_02149 hj SF
  hj PF
SJAG_02052 hj SF
  hj PF
SJAG_03918 hj SF
  hj PF
SJAG_02130 hj SF
  hj PF
SJAG_04712 hj SF
  hj PF
SJAG_04374 hj SF
  hj PF
SJAG_02956 hj SF
  hj PF
SJAG_02938 hj SF
  hj PF
SJAG_02569 hj SF
  hj PF
SJAG_02406 hj SF
  hj PF
SJAG_04812 hj SF
  hj PF
SJAG_00926 hj SF
  hj PF
SJAG_01930 hj SF
  hj PF
SJAG_03538 hj SF
  hj PF
SJAG_02138 hj SF
  hj PF
SJAG_02048 hj SF
  hj PF
SJAG_00045 hj SF
  hj PF
SJAG_03473 hj SF
  hj PF
SJAG_00163 hj SF
  hj PF
SJAG_00067 hj SF
  hj PF
SJAG_04584 hj SF
  hj PF
SJAG_03911 hj SF
  hj PF
SJAG_00124 hj SF
  hj PF
SJAG_03388 hj SF
  hj PF
SJAG_02252 hj SF
  hj PF
SJAG_03879 hj SF
  hj PF
SJAG_01681 hj SF
  hj PF
SJAG_02218 hj SF
  hj PF
SJAG_00210 hj SF
  hj PF
SJAG_04191 hj SF
  hj PF
SJAG_00693 hj SF
  hj PF
SJAG_01263 hj SF
  hj PF
SJAG_05115 hj SF
  hj PF
SJAG_04813 hj SF
  hj PF No hits
SJAG_01243 hj SF
  hj PF
SJAG_03484 hj SF
  hj PF No hits
SJAG_04092 hj SF
  hj PF No hits
SJAG_02810 hj SF
  hj PF
SJAG_00987 hj SF
  hj PF
SJAG_01323 hj SF
  hj PF