DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Helobdella robusta
Taxonomy: Eukaryota; Metazoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhynchobdellida; Glossiphoniidae; Helobdella
source (downloaded: 2007-10-02)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Helro1|145480 External link hx SF
  hx PF No hits
jgi|Helro1|125367 External link hx SF
  hx PF
jgi|Helro1|138776 External link hx SF
  hx PF
jgi|Helro1|138771 External link hx SF
  hx PF
jgi|Helro1|148702 External link hx SF
  hx PF
jgi|Helro1|105412 External link hx SF
  hx PF
jgi|Helro1|183791 External link hx SF
  hx PF
jgi|Helro1|194341 External link hx SF
  hx PF
jgi|Helro1|167645 External link hx SF
  hx PF
jgi|Helro1|168416 External link hx SF
  hx PF
jgi|Helro1|192840 External link hx SF
  hx PF
jgi|Helro1|152928 External link hx SF
  hx PF
jgi|Helro1|153485 External link hx SF
  hx PF
jgi|Helro1|153213 External link hx SF
  hx PF
jgi|Helro1|148068 External link hx SF
  hx PF
jgi|Helro1|175348 External link hx SF
  hx PF
jgi|Helro1|120308 External link hx SF
  hx PF
jgi|Helro1|83056 External link hx SF
  hx PF
jgi|Helro1|102838 External link hx SF
  hx PF
jgi|Helro1|194780 External link hx SF
  hx PF
jgi|Helro1|83646 External link hx SF
  hx PF
jgi|Helro1|164610 External link hx SF
  hx PF
jgi|Helro1|131399 External link hx SF
  hx PF
jgi|Helro1|180112 External link hx SF
  hx PF
jgi|Helro1|70815 External link hx SF
  hx PF
jgi|Helro1|70524 External link hx SF
  hx PF
jgi|Helro1|113693 External link hx SF
  hx PF
jgi|Helro1|66090 External link hx SF
  hx PF
jgi|Helro1|144940 External link hx SF
  hx PF
jgi|Helro1|80803 External link hx SF
  hx PF
jgi|Helro1|81228 External link hx SF
  hx PF
jgi|Helro1|79060 External link hx SF
  hx PF
jgi|Helro1|143547 External link hx SF
  hx PF
jgi|Helro1|67484 External link hx SF
  hx PF
jgi|Helro1|70853 External link hx SF
  hx PF
jgi|Helro1|147055 External link hx SF
  hx PF
jgi|Helro1|145048 External link hx SF
  hx PF
jgi|Helro1|145054 External link hx SF
  hx PF
jgi|Helro1|81466 External link hx SF
  hx PF
jgi|Helro1|82644 External link hx SF
  hx PF
jgi|Helro1|71280 External link hx SF
  hx PF
jgi|Helro1|193553 External link hx SF
  hx PF
jgi|Helro1|106233 External link hx SF
  hx PF
jgi|Helro1|194580 External link hx SF
  hx PF
jgi|Helro1|77679 External link hx SF
  hx PF
jgi|Helro1|71774 External link hx SF
  hx PF
jgi|Helro1|67463 External link hx SF
  hx PF
jgi|Helro1|190681 External link hx SF
  hx PF
jgi|Helro1|76907 External link hx SF
  hx PF
jgi|Helro1|139475 External link hx SF
  hx PF