DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Tetrahymena thermophila 1
Taxonomy: Eukaryota; Alveolata; Ciliophora; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
source (downloaded: 2005-09-08)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
19.m00375 External link hy SF
  hy PF
31.m00342 External link hy SF
  hy PF
20.m00328 External link hy SF
  hy PF
191.m00057 External link hy SF
  hy PF
109.m00081 External link hy SF
  hy PF
54.m00211 External link hy SF
  hy PF
27.m00326 External link hy SF
  hy PF
268.m00028 External link hy SF
  hy PF
225.m00061 External link hy SF
  hy PF No hits
16.m00274 External link hy SF
  hy PF No hits
37.m00183 External link hy SF
  hy PF
3.m01664 External link hy SF
  hy PF No hits
760.m00004 External link hy SF
  hy PF
1183.m00003 External link hy SF
  hy PF
1198.m00003 External link hy SF
  hy PF
970.m00002 External link hy SF
  hy PF
683.m00005 External link hy SF
  hy PF
1039.m00002 External link hy SF
  hy PF
675.m00005 External link hy SF
  hy PF
1407.m00002 External link hy SF
  hy PF
646.m00005 External link hy SF
  hy PF
32.m00263 External link hy SF
  hy PF
39.m00157 External link hy SF
  hy PF
78.m00176 External link hy SF
  hy PF No hits
61.m00253 External link hy SF
  hy PF
68.m00149 External link hy SF
  hy PF No hits
34.m00395 External link hy SF
  hy PF
131.m00109 External link hy SF
  hy PF
77.m00193 External link hy SF
  hy PF
11.m00294 External link hy SF
  hy PF
115.m00125 External link hy SF
  hy PF
220.m00036 External link hy SF
  hy PF
7.m00543 External link hy SF
  hy PF
1.m00994 External link hy SF
  hy PF
232.m00052 External link hy SF
  hy PF
108.m00119 External link hy SF
  hy PF
39.m00181 External link hy SF
  hy PF
145.m00082 External link hy SF
  hy PF
76.m00226 External link hy SF
  hy PF
134.m00138 External link hy SF
  hy PF
41.m00205 External link hy SF
  hy PF
3.m01714 External link hy SF
  hy PF
62.m00149 External link hy SF
  hy PF
1.m00794 External link hy SF
  hy PF
47.m00211 External link hy SF
  hy PF
88.m00116 External link hy SF
  hy PF
34.m00224 External link hy SF
  hy PF
59.m00259 External link hy SF
  hy PF
94.m00161 External link hy SF
  hy PF
64.m00232 External link hy SF
  hy PF