DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Schistosoma mansoni Early Assembly
Taxonomy: Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma
source (downloaded: 2007-07-20)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
29196.m000648 hz SF
  hz PF
29463.m000639 hz SF
  hz PF
29134.m000755 hz SF
  hz PF
29104.m001793 hz SF
  hz PF
29075.m001692 hz SF
  hz PF
29306.m001274 hz SF
  hz PF
29284.m000454 hz SF
  hz PF
29284.m000530 hz SF
  hz PF
29264.m000330 hz SF
  hz PF
29082.m000963 hz SF
  hz PF
31050.m000955 hz SF
  hz PF
29055.m001731 hz SF
  hz PF
29045.m001811 hz SF
  hz PF
29061.m001268 hz SF
  hz PF
29472.m000491 hz SF
  hz PF
29305.m001069 hz SF
  hz PF
29272.m000262 hz SF
  hz PF
29076.m001453 hz SF
  hz PF
29042.m003503 hz SF
  hz PF
29617.m000099 hz SF
  hz PF
29140.m001252 hz SF
  hz PF
29066.m001183 hz SF
  hz PF
29630.m000092 hz SF
  hz PF
29629.m000215 hz SF
  hz PF
29111.m001054 hz SF
  hz PF
29339.m000406 hz SF
  hz PF
29225.m000377 hz SF
  hz PF
29179.m000441 hz SF
  hz PF
29148.m000436 hz SF
  hz PF
29644.m000163 hz SF
  hz PF
29159.m000796 hz SF
  hz PF
29282.m000380 hz SF
  hz PF
29198.m000894 hz SF
  hz PF
29141.m001177 hz SF
  hz PF
29309.m000162 hz SF
  hz PF
29112.m000972 hz SF
  hz PF
29323.m000140 hz SF
  hz PF
29323.m000143 hz SF
  hz PF
29568.m000089 hz SF
  hz PF
29089.m001302 hz SF
  hz PF
29048.m001498 hz SF
  hz PF
29048.m001721 hz SF
  hz PF
31047.m000204 hz SF
  hz PF
29042.m003527 hz SF
  hz PF
29055.m001720 hz SF
  hz PF
29061.m001248 hz SF
  hz PF
29362.m000517 hz SF
  hz PF
29074.m000965 hz SF
  hz PF
29356.m000299 hz SF
  hz PF
29115.m001335 hz SF
  hz PF