DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Microcebus murinus 49_1 (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSMICP00000002081 External link i2 SF
  i2 PF
ENSMICP00000003861 External link i2 SF
  i2 PF
ENSMICP00000012976 External link i2 SF
  i2 PF
ENSMICP00000004145 External link i2 SF
  i2 PF
ENSMICP00000009484 External link i2 SF
  i2 PF
ENSMICP00000009487 External link i2 SF
  i2 PF
ENSMICP00000011045 External link i2 SF
  i2 PF
ENSMICP00000007053 External link i2 SF
  i2 PF
ENSMICP00000008327 External link i2 SF
  i2 PF
ENSMICP00000010354 External link i2 SF
  i2 PF
ENSMICP00000014357 External link i2 SF
  i2 PF
ENSMICP00000015025 External link i2 SF
  i2 PF
ENSMICP00000003748 External link i2 SF
  i2 PF
ENSMICP00000014302 External link i2 SF
  i2 PF
ENSMICP00000001456 External link i2 SF
  i2 PF
ENSMICP00000003390 External link i2 SF
  i2 PF
ENSMICP00000009669 External link i2 SF
  i2 PF
ENSMICP00000005572 External link i2 SF
  i2 PF
ENSMICP00000013808 External link i2 SF
  i2 PF
ENSMICP00000014239 External link i2 SF
  i2 PF
ENSMICP00000012659 External link i2 SF
  i2 PF
ENSMICP00000008341 External link i2 SF
  i2 PF
ENSMICP00000010945 External link i2 SF
  i2 PF
ENSMICP00000007904 External link i2 SF
  i2 PF
ENSMICP00000007841 External link i2 SF
  i2 PF
ENSMICP00000011656 External link i2 SF
  i2 PF
ENSMICP00000015482 External link i2 SF
  i2 PF
ENSMICP00000009078 External link i2 SF
  i2 PF
ENSMICP00000014720 External link i2 SF
  i2 PF
ENSMICP00000015987 External link i2 SF
  i2 PF
ENSMICP00000011101 External link i2 SF
  i2 PF
ENSMICP00000007545 External link i2 SF
  i2 PF
ENSMICP00000015141 External link i2 SF
  i2 PF
ENSMICP00000002084 External link i2 SF
  i2 PF
ENSMICP00000006432 External link i2 SF
  i2 PF
ENSMICP00000015180 External link i2 SF
  i2 PF
ENSMICP00000006641 External link i2 SF
  i2 PF
ENSMICP00000000026 External link i2 SF
  i2 PF
ENSMICP00000012335 External link i2 SF
  i2 PF
ENSMICP00000008614 External link i2 SF
  i2 PF
ENSMICP00000003293 External link i2 SF
  i2 PF
ENSMICP00000012264 External link i2 SF
  i2 PF
ENSMICP00000008878 External link i2 SF
  i2 PF
ENSMICP00000010988 External link i2 SF
  i2 PF
ENSMICP00000000810 External link i2 SF
  i2 PF
ENSMICP00000013424 External link i2 SF
  i2 PF
ENSMICP00000015320 External link i2 SF
  i2 PF
ENSMICP00000002853 External link i2 SF
  i2 PF
ENSMICP00000003726 External link i2 SF
  i2 PF
ENSMICP00000003008 External link i2 SF
  i2 PF