DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Coccidioides immitis H538.4
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides
source (downloaded: 2008-05-23)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
CIHG_08749 i3 SF
  i3 PF
CIHG_07345 i3 SF
  i3 PF
CIHG_06244 i3 SF
  i3 PF
CIHG_06105 i3 SF
  i3 PF
CIHG_03737 i3 SF
  i3 PF
CIHG_09006 i3 SF
  i3 PF
CIHG_02424 i3 SF
  i3 PF
CIHG_04594 i3 SF
  i3 PF
CIHG_01289 i3 SF
  i3 PF
CIHG_08139 i3 SF
  i3 PF
CIHG_08212 i3 SF
  i3 PF
CIHG_01500 i3 SF
  i3 PF
CIHG_01379 i3 SF
  i3 PF
CIHG_10011 i3 SF
  i3 PF No hits
CIHG_07885 i3 SF
  i3 PF
CIHG_02713 i3 SF
  i3 PF
CIHG_00230 i3 SF
  i3 PF
CIHG_09055 i3 SF
  i3 PF
CIHG_07526 i3 SF
  i3 PF
CIHG_01948 i3 SF
  i3 PF
CIHG_09126 i3 SF
  i3 PF
CIHG_00863 i3 SF
  i3 PF
CIHG_00213 i3 SF
  i3 PF
CIHG_06711 i3 SF
  i3 PF No hits
CIHG_03430 i3 SF
  i3 PF
CIHG_04809 i3 SF
  i3 PF
CIHG_04635 i3 SF
  i3 PF
CIHG_05181 i3 SF
  i3 PF
CIHG_00104 i3 SF
  i3 PF
CIHG_01525 i3 SF
  i3 PF
CIHG_05461 i3 SF
  i3 PF
CIHG_08164 i3 SF
  i3 PF
CIHG_04106 i3 SF
  i3 PF
CIHG_06792 i3 SF
  i3 PF
CIHG_09477 i3 SF
  i3 PF
CIHG_06258 i3 SF
  i3 PF
CIHG_00153 i3 SF
  i3 PF
CIHG_09772 i3 SF
  i3 PF
CIHG_08662 i3 SF
  i3 PF No hits
CIHG_09481 i3 SF
  i3 PF
CIHG_04095 i3 SF
  i3 PF
CIHG_04881 i3 SF
  i3 PF
CIHG_09578 i3 SF
  i3 PF
CIHG_05016 i3 SF
  i3 PF
CIHG_05420 i3 SF
  i3 PF
CIHG_00340 i3 SF
  i3 PF
CIHG_03850 i3 SF
  i3 PF
CIHG_00343 i3 SF
  i3 PF
CIHG_08583 i3 SF
  i3 PF
CIHG_00063 i3 SF
  i3 PF