DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Coccidioides immitis RMSCC 2394
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides
source (downloaded: 2008-05-23)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
CIRG_02797 i4 SF
  i4 PF
CIRG_02693 i4 SF
  i4 PF
CIRG_01349 i4 SF
  i4 PF
CIRG_00675 i4 SF
  i4 PF
CIRG_00046 i4 SF
  i4 PF
CIRG_09519 i4 SF
  i4 PF
CIRG_04918 i4 SF
  i4 PF
CIRG_08583 i4 SF
  i4 PF No hits
CIRG_04094 i4 SF
  i4 PF
CIRG_00708 i4 SF
  i4 PF
CIRG_06618 i4 SF
  i4 PF
CIRG_06972 i4 SF
  i4 PF
CIRG_01351 i4 SF
  i4 PF
CIRG_07186 i4 SF
  i4 PF
CIRG_01376 i4 SF
  i4 PF
CIRG_07214 i4 SF
  i4 PF
CIRG_09547 i4 SF
  i4 PF
CIRG_10125 i4 SF
  i4 PF
CIRG_06561 i4 SF
  i4 PF
CIRG_08781 i4 SF
  i4 PF
CIRG_01144 i4 SF
  i4 PF
CIRG_04450 i4 SF
  i4 PF
CIRG_05699 i4 SF
  i4 PF
CIRG_06273 i4 SF
  i4 PF
CIRG_03917 i4 SF
  i4 PF
CIRG_00750 i4 SF
  i4 PF
CIRG_06803 i4 SF
  i4 PF
CIRG_01937 i4 SF
  i4 PF
CIRG_05881 i4 SF
  i4 PF
CIRG_03883 i4 SF
  i4 PF
CIRG_05978 i4 SF
  i4 PF
CIRG_09780 i4 SF
  i4 PF
CIRG_05636 i4 SF
  i4 PF
CIRG_05237 i4 SF
  i4 PF
CIRG_07033 i4 SF
  i4 PF
CIRG_06886 i4 SF
  i4 PF
CIRG_04343 i4 SF
  i4 PF
CIRG_07817 i4 SF
  i4 PF
CIRG_03948 i4 SF
  i4 PF
CIRG_10098 i4 SF
  i4 PF
CIRG_09032 i4 SF
  i4 PF
CIRG_03458 i4 SF
  i4 PF
CIRG_06187 i4 SF
  i4 PF
CIRG_06760 i4 SF
  i4 PF
CIRG_04022 i4 SF
  i4 PF
CIRG_03280 i4 SF
  i4 PF
CIRG_02292 i4 SF
  i4 PF
CIRG_07634 i4 SF
  i4 PF
CIRG_08253 i4 SF
  i4 PF
CIRG_04278 i4 SF
  i4 PF