DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Coccidioides immitis RMSCC 3703
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides
source (downloaded: 2008-05-23)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
CISG_05574 i5 SF
  i5 PF
CISG_05145 i5 SF
  i5 PF
CISG_06694 i5 SF
  i5 PF
CISG_08292 i5 SF
  i5 PF
CISG_03986 i5 SF
  i5 PF No hits
CISG_04706 i5 SF
  i5 PF
CISG_05271 i5 SF
  i5 PF
CISG_03672 i5 SF
  i5 PF
CISG_02000 i5 SF
  i5 PF
CISG_05143 i5 SF
  i5 PF
CISG_10275 i5 SF
  i5 PF
CISG_04722 i5 SF
  i5 PF
CISG_00505 i5 SF
  i5 PF
CISG_09126 i5 SF
  i5 PF
CISG_04681 i5 SF
  i5 PF
CISG_01860 i5 SF
  i5 PF
CISG_07093 i5 SF
  i5 PF
CISG_07319 i5 SF
  i5 PF
CISG_07426 i5 SF
  i5 PF
CISG_04700 i5 SF
  i5 PF
CISG_10259 i5 SF
  i5 PF
CISG_09884 i5 SF
  i5 PF
CISG_03787 i5 SF
  i5 PF
CISG_06312 i5 SF
  i5 PF No hits
CISG_00760 i5 SF
  i5 PF
CISG_03867 i5 SF
  i5 PF
CISG_04454 i5 SF
  i5 PF
CISG_02916 i5 SF
  i5 PF
CISG_00817 i5 SF
  i5 PF
CISG_05400 i5 SF
  i5 PF
CISG_08274 i5 SF
  i5 PF
CISG_07720 i5 SF
  i5 PF
CISG_08885 i5 SF
  i5 PF
CISG_04134 i5 SF
  i5 PF
CISG_09952 i5 SF
  i5 PF
CISG_07417 i5 SF
  i5 PF
CISG_06782 i5 SF
  i5 PF
CISG_00324 i5 SF
  i5 PF
CISG_04083 i5 SF
  i5 PF
CISG_07105 i5 SF
  i5 PF
CISG_00455 i5 SF
  i5 PF
CISG_07389 i5 SF
  i5 PF
CISG_09678 i5 SF
  i5 PF
CISG_03522 i5 SF
  i5 PF
CISG_00377 i5 SF
  i5 PF
CISG_06823 i5 SF
  i5 PF
CISG_07953 i5 SF
  i5 PF
CISG_05118 i5 SF
  i5 PF
CISG_09389 i5 SF
  i5 PF
CISG_07871 i5 SF
  i5 PF