DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Coccidioides posadasii RMSCC 3488
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides
source (downloaded: 2008-05-23)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
CPAG_03376 i6 SF
  i6 PF
CPAG_01584 i6 SF
  i6 PF
CPAG_03271 i6 SF
  i6 PF
CPAG_00268 i6 SF
  i6 PF
CPAG_02227 i6 SF
  i6 PF
CPAG_06877 i6 SF
  i6 PF
CPAG_07521 i6 SF
  i6 PF
CPAG_02832 i6 SF
  i6 PF
CPAG_08217 i6 SF
  i6 PF No hits
CPAG_04591 i6 SF
  i6 PF
CPAG_05937 i6 SF
  i6 PF
CPAG_06098 i6 SF
  i6 PF
CPAG_04425 i6 SF
  i6 PF
CPAG_08576 i6 SF
  i6 PF
CPAG_05406 i6 SF
  i6 PF
CPAG_01793 i6 SF
  i6 PF
CPAG_05696 i6 SF
  i6 PF
CPAG_08681 i6 SF
  i6 PF
CPAG_04990 i6 SF
  i6 PF
CPAG_08959 i6 SF
  i6 PF
CPAG_01228 i6 SF
  i6 PF
CPAG_01582 i6 SF
  i6 PF
CPAG_04524 i6 SF
  i6 PF
CPAG_01526 i6 SF
  i6 PF
CPAG_04388 i6 SF
  i6 PF
CPAG_04000 i6 SF
  i6 PF
CPAG_00842 i6 SF
  i6 PF
CPAG_00595 i6 SF
  i6 PF
CPAG_01348 i6 SF
  i6 PF No hits
CPAG_07868 i6 SF
  i6 PF No hits
CPAG_08931 i6 SF
  i6 PF
CPAG_00317 i6 SF
  i6 PF
CPAG_07007 i6 SF
  i6 PF
CPAG_07245 i6 SF
  i6 PF
CPAG_09839 i6 SF
  i6 PF
CPAG_00084 i6 SF
  i6 PF
CPAG_01008 i6 SF
  i6 PF
CPAG_03610 i6 SF
  i6 PF
CPAG_00539 i6 SF
  i6 PF
CPAG_06215 i6 SF
  i6 PF
CPAG_05951 i6 SF
  i6 PF
CPAG_04942 i6 SF
  i6 PF
CPAG_04933 i6 SF
  i6 PF
CPAG_05048 i6 SF
  i6 PF
CPAG_05043 i6 SF
  i6 PF
CPAG_07536 i6 SF
  i6 PF
CPAG_06468 i6 SF
  i6 PF
CPAG_07514 i6 SF
  i6 PF
CPAG_06433 i6 SF
  i6 PF
CPAG_08723 i6 SF
  i6 PF