DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Coccidioides posadasii str. Silveira
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; mitosporic Onygenales; Coccidioides
source (downloaded: 2008-05-23)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
CPSG_01239 i7 SF
  i7 PF
CPSG_03086 i7 SF
  i7 PF
CPSG_01347 i7 SF
  i7 PF
CPSG_04326 i7 SF
  i7 PF
CPSG_02425 i7 SF
  i7 PF
CPSG_08350 i7 SF
  i7 PF No hits
CPSG_04728 i7 SF
  i7 PF
CPSG_09480 i7 SF
  i7 PF
CPSG_02286 i7 SF
  i7 PF
CPSG_00014 i7 SF
  i7 PF
CPSG_02794 i7 SF
  i7 PF No hits
CPSG_09244 i7 SF
  i7 PF
CPSG_06993 i7 SF
  i7 PF
CPSG_02340 i7 SF
  i7 PF
CPSG_01609 i7 SF
  i7 PF
CPSG_06990 i7 SF
  i7 PF
CPSG_06286 i7 SF
  i7 PF
CPSG_00941 i7 SF
  i7 PF
CPSG_00219 i7 SF
  i7 PF
CPSG_09038 i7 SF
  i7 PF
CPSG_04867 i7 SF
  i7 PF
CPSG_07017 i7 SF
  i7 PF
CPSG_06323 i7 SF
  i7 PF
CPSG_08425 i7 SF
  i7 PF
CPSG_09740 i7 SF
  i7 PF
CPSG_09021 i7 SF
  i7 PF
CPSG_06487 i7 SF
  i7 PF
CPSG_04484 i7 SF
  i7 PF
CPSG_01557 i7 SF
  i7 PF
CPSG_06914 i7 SF
  i7 PF
CPSG_09134 i7 SF
  i7 PF
CPSG_02952 i7 SF
  i7 PF
CPSG_09608 i7 SF
  i7 PF
CPSG_01542 i7 SF
  i7 PF
CPSG_05171 i7 SF
  i7 PF
CPSG_06378 i7 SF
  i7 PF
CPSG_08995 i7 SF
  i7 PF
CPSG_08703 i7 SF
  i7 PF No hits
CPSG_09498 i7 SF
  i7 PF
CPSG_06370 i7 SF
  i7 PF
CPSG_05963 i7 SF
  i7 PF
CPSG_09471 i7 SF
  i7 PF
CPSG_03087 i7 SF
  i7 PF
CPSG_00684 i7 SF
  i7 PF
CPSG_07044 i7 SF
  i7 PF
CPSG_09215 i7 SF
  i7 PF
CPSG_07602 i7 SF
  i7 PF No hits
CPSG_09786 i7 SF
  i7 PF
CPSG_09137 i7 SF
  i7 PF
CPSG_07609 i7 SF
  i7 PF