DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Postia placenta
Taxonomy: Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Postia
source (downloaded: 2007-07-09)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Pospl1|98148|fgenesh3_pg.287__6 External link ia SF
  ia PF
jgi|Pospl1|47293|e_gw1.3.167.1 External link ia SF
  ia PF No hits
jgi|Pospl1|128634|estExt_fgenesh3_pg.C_2220007 External link ia SF
  ia PF
jgi|Pospl1|57511|e_gw1.63.68.1 External link ia SF
  ia PF No hits
jgi|Pospl1|101096|fgenesh3_pg.9__37 External link ia SF
  ia PF No hits
jgi|Pospl1|60615|e_gw1.127.77.1 External link ia SF
  ia PF No hits
jgi|Pospl1|55754|e_gw1.222.36.1 External link ia SF
  ia PF No hits
jgi|Pospl1|28204|gw1.137.35.1 External link ia SF
  ia PF
jgi|Pospl1|90448|fgenesh3_pm.64__2 External link ia SF
  ia PF
jgi|Pospl1|128977|estExt_fgenesh3_pg.C_1830024 External link ia SF
  ia PF
jgi|Pospl1|129515|estExt_fgenesh3_pg.C_43180001 External link ia SF
  ia PF
jgi|Pospl1|99485|fgenesh3_pg.61__41 External link ia SF
  ia PF
jgi|Pospl1|126124|estExt_fgenesh3_pg.C_200005 External link ia SF
  ia PF
jgi|Pospl1|92178|fgenesh3_pg.184__12 External link ia SF
  ia PF
jgi|Pospl1|113058|estExt_Genewise1Plus.C_720039 External link ia SF
  ia PF
jgi|Pospl1|92548|fgenesh3_pg.129__33 External link ia SF
  ia PF
jgi|Pospl1|93876|fgenesh3_pg.3__96 External link ia SF
  ia PF
jgi|Pospl1|129226|estExt_fgenesh3_pg.C_380065 External link ia SF
  ia PF
jgi|Pospl1|92181|fgenesh3_pg.184__15 External link ia SF
  ia PF
jgi|Pospl1|92174|fgenesh3_pg.184__8 External link ia SF
  ia PF
jgi|Pospl1|95151|fgenesh3_pg.16__12 External link ia SF
  ia PF
jgi|Pospl1|109587|estExt_Genewise1Plus.C_820043 External link ia SF
  ia PF
jgi|Pospl1|116223|estExt_Genewise1Plus.C_520040 External link ia SF
  ia PF
jgi|Pospl1|101465|fgenesh3_pg.63__84 External link ia SF
  ia PF
jgi|Pospl1|91105|fgenesh3_pg.8__107 External link ia SF
  ia PF
jgi|Pospl1|104357|fgenesh3_pg.198__22 External link ia SF
  ia PF
jgi|Pospl1|19733|gw1.106.6.1 External link ia SF
  ia PF
jgi|Pospl1|58153|e_gw1.125.37.1 External link ia SF
  ia PF
jgi|Pospl1|103701|fgenesh3_pg.101__12 External link ia SF
  ia PF
jgi|Pospl1|92468|fgenesh3_pg.105__10 External link ia SF
  ia PF
jgi|Pospl1|46874|e_gw1.18.8.1 External link ia SF
  ia PF
jgi|Pospl1|97457|fgenesh3_pg.152__24 External link ia SF
  ia PF
jgi|Pospl1|127780|estExt_fgenesh3_pg.C_1170016 External link ia SF
  ia PF
jgi|Pospl1|115241|estExt_Genewise1Plus.C_930037 External link ia SF
  ia PF
jgi|Pospl1|97461|fgenesh3_pg.152__28 External link ia SF
  ia PF
jgi|Pospl1|92406|fgenesh3_pg.92__38 External link ia SF
  ia PF
jgi|Pospl1|97463|fgenesh3_pg.152__30 External link ia SF
  ia PF
jgi|Pospl1|117085|estExt_Genewise1Plus.C_540032 External link ia SF
  ia PF
jgi|Pospl1|100640|fgenesh3_pg.178__21 External link ia SF
  ia PF
jgi|Pospl1|114303|estExt_Genewise1Plus.C_170054 External link ia SF
  ia PF
jgi|Pospl1|116269|estExt_Genewise1Plus.C_60044 External link ia SF
  ia PF
jgi|Pospl1|127456|estExt_fgenesh3_pg.C_580080 External link ia SF
  ia PF
jgi|Pospl1|44698|e_gw1.26.62.1 External link ia SF
  ia PF
jgi|Pospl1|116866|estExt_Genewise1Plus.C_730004 External link ia SF
  ia PF
jgi|Pospl1|128423|estExt_fgenesh3_pg.C_670021 External link ia SF
  ia PF
jgi|Pospl1|114057|estExt_Genewise1Plus.C_90079 External link ia SF
  ia PF
jgi|Pospl1|92233|fgenesh3_pg.305__5 External link ia SF
  ia PF
jgi|Pospl1|53137|e_gw1.218.1.1 External link ia SF
  ia PF
jgi|Pospl1|108608|estExt_Genewise1Plus.C_80228 External link ia SF
  ia PF
jgi|Pospl1|92179|fgenesh3_pg.184__13 External link ia SF
  ia PF