DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Culex pipiens quinquefasciatus
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
source (downloaded: 2007-07-25)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
Translation:9972 ie SF
  ie PF
Translation:9617 ie SF
  ie PF
Translation:9618 ie SF
  ie PF
Translation:11520 ie SF
  ie PF
Translation:9 ie SF
  ie PF
Translation:2114 ie SF
  ie PF
Translation:12073 ie SF
  ie PF
Translation:11161 ie SF
  ie PF
Translation:10399 ie SF
  ie PF
Translation:10401 ie SF
  ie PF
Translation:2077 ie SF
  ie PF
Translation:6354 ie SF
  ie PF
Translation:7822 ie SF
  ie PF
Translation:13906 ie SF
  ie PF
Translation:6830 ie SF
  ie PF
Translation:12910 ie SF
  ie PF
Translation:12911 ie SF
  ie PF
Translation:7191 ie SF
  ie PF
Translation:12296 ie SF
  ie PF
Translation:4882 ie SF
  ie PF
Translation:12298 ie SF
  ie PF
Translation:6033 ie SF
  ie PF
Translation:2976 ie SF
  ie PF
Translation:8327 ie SF
  ie PF
Translation:8410 ie SF
  ie PF
Translation:8411 ie SF
  ie PF
Translation:3917 ie SF
  ie PF
Translation:12440 ie SF
  ie PF
Translation:5404 ie SF
  ie PF
Translation:3902 ie SF
  ie PF
Translation:63 ie SF
  ie PF
Translation:6560 ie SF
  ie PF
Translation:7057 ie SF
  ie PF
Translation:3666 ie SF
  ie PF
Translation:10159 ie SF
  ie PF
Translation:12700 ie SF
  ie PF
Translation:2307 ie SF
  ie PF
Translation:1481 ie SF
  ie PF
Translation:6951 ie SF
  ie PF
Translation:10162 ie SF
  ie PF
Translation:11211 ie SF
  ie PF
Translation:12698 ie SF
  ie PF
Translation:14161 ie SF
  ie PF
Translation:12010 ie SF
  ie PF
Translation:10808 ie SF
  ie PF
Translation:9081 ie SF
  ie PF
Translation:2313 ie SF
  ie PF
Translation:6587 ie SF
  ie PF
Translation:608 ie SF
  ie PF
Translation:476 ie SF
  ie PF