DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Microcebus murinus 49_1 (all transcripts)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Cheirogaleidae; Microcebus
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSMICP00000002081 External link io SF
  io PF
ENSMICP00000003861 External link io SF
  io PF
ENSMICP00000009487 External link io SF
  io PF
ENSMICP00000009484 External link io SF
  io PF
ENSMICP00000012976 External link io SF
  io PF
ENSMICP00000004145 External link io SF
  io PF
ENSMICP00000011045 External link io SF
  io PF
ENSMICP00000007053 External link io SF
  io PF
ENSMICP00000008327 External link io SF
  io PF
ENSMICP00000010354 External link io SF
  io PF
ENSMICP00000015025 External link io SF
  io PF
ENSMICP00000014357 External link io SF
  io PF
ENSMICP00000003748 External link io SF
  io PF
ENSMICP00000014302 External link io SF
  io PF
ENSMICP00000001456 External link io SF
  io PF
ENSMICP00000009669 External link io SF
  io PF
ENSMICP00000003390 External link io SF
  io PF
ENSMICP00000005572 External link io SF
  io PF
ENSMICP00000013808 External link io SF
  io PF
ENSMICP00000014239 External link io SF
  io PF
ENSMICP00000012659 External link io SF
  io PF
ENSMICP00000008341 External link io SF
  io PF
ENSMICP00000010945 External link io SF
  io PF
ENSMICP00000007904 External link io SF
  io PF
ENSMICP00000007841 External link io SF
  io PF
ENSMICP00000015482 External link io SF
  io PF
ENSMICP00000011656 External link io SF
  io PF
ENSMICP00000015987 External link io SF
  io PF
ENSMICP00000011101 External link io SF
  io PF
ENSMICP00000009078 External link io SF
  io PF
ENSMICP00000014720 External link io SF
  io PF
ENSMICP00000002084 External link io SF
  io PF
ENSMICP00000007545 External link io SF
  io PF
ENSMICP00000015141 External link io SF
  io PF
ENSMICP00000002853 External link io SF
  io PF
ENSMICP00000015180 External link io SF
  io PF
ENSMICP00000009908 External link io SF
  io PF
ENSMICP00000008211 External link io SF
  io PF
ENSMICP00000005775 External link io SF
  io PF
ENSMICP00000004609 External link io SF
  io PF
ENSMICP00000000026 External link io SF
  io PF
ENSMICP00000000810 External link io SF
  io PF
ENSMICP00000012335 External link io SF
  io PF
ENSMICP00000006432 External link io SF
  io PF
ENSMICP00000010322 External link io SF
  io PF
ENSMICP00000006836 External link io SF
  io PF
ENSMICP00000006641 External link io SF
  io PF
ENSMICP00000003726 External link io SF
  io PF
ENSMICP00000003293 External link io SF
  io PF
ENSMICP00000007509 External link io SF
  io PF