DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Paramecium tetraurelia
Taxonomy: Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium
source (downloaded: 2007-07-31)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
GSPATP00038123001 External link ir SF
  ir PF
GSPATP00014856001 External link ir SF
  ir PF
GSPATP00036324001 External link ir SF
  ir PF
GSPATP00018663001 External link ir SF
  ir PF
GSPATP00032240001 External link ir SF
  ir PF
GSPATP00018037001 External link ir SF
  ir PF
GSPATP00021829001 External link ir SF
  ir PF
GSPATP00020881001 External link ir SF
  ir PF
GSPATP00022081001 External link ir SF
  ir PF
GSPATP00005632001 External link ir SF
  ir PF
GSPATP00007102001 External link ir SF
  ir PF
GSPATP00000273001 External link ir SF
  ir PF
GSPATP00014968001 External link ir SF
  ir PF
GSPATP00016566001 External link ir SF
  ir PF
GSPATP00024295001 External link ir SF
  ir PF
GSPATP00031708001 External link ir SF
  ir PF
GSPATP00017809001 External link ir SF
  ir PF
GSPATP00007451001 External link ir SF
  ir PF
GSPATP00000689001 External link ir SF
  ir PF
GSPATP00036096001 External link ir SF
  ir PF
GSPATP00026022001 External link ir SF
  ir PF
GSPATP00032351001 External link ir SF
  ir PF
GSPATP00026207001 External link ir SF
  ir PF
GSPATP00006758001 External link ir SF
  ir PF No hits
GSPATP00022126001 External link ir SF
  ir PF
GSPATP00002859001 External link ir SF
  ir PF No hits
GSPATP00020925001 External link ir SF
  ir PF No hits
GSPATP00017539001 External link ir SF
  ir PF No hits
GSPATP00025004001 External link ir SF
  ir PF
GSPATP00016570001 External link ir SF
  ir PF
GSPATP00030355001 External link ir SF
  ir PF
GSPATP00002311001 External link ir SF
  ir PF No hits
GSPATP00023542001 External link ir SF
  ir PF
GSPATP00008333001 External link ir SF
  ir PF
GSPATP00012744001 External link ir SF
  ir PF
GSPATP00018890001 External link ir SF
  ir PF
GSPATP00032913001 External link ir SF
  ir PF
GSPATP00020727001 External link ir SF
  ir PF No hits
GSPATP00018421001 External link ir SF
  ir PF No hits
GSPATP00007097001 External link ir SF
  ir PF No hits
GSPATP00002038001 External link ir SF
  ir PF No hits
GSPATP00034502001 External link ir SF
  ir PF No hits
GSPATP00000575001 External link ir SF
  ir PF
GSPATP00026658001 External link ir SF
  ir PF
GSPATP00007098001 External link ir SF
  ir PF
GSPATP00021958001 External link ir SF
  ir PF No hits
GSPATP00030494001 External link ir SF
  ir PF No hits
GSPATP00035758001 External link ir SF
  ir PF No hits
GSPATP00010131001 External link ir SF
  ir PF
GSPATP00028479001 External link ir SF
  ir PF