DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Phytophthora infestans T30-4
Taxonomy: Eukaryota; stramenopiles; Oomycetes; Peronosporales; Phytophthora
source (downloaded: 2007-07-14)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
PITG_00116 iy SF
  iy PF
PITG_06354 iy SF
  iy PF
PITG_07302 iy SF
  iy PF
PITG_00770 iy SF
  iy PF
PITG_20087 iy SF
  iy PF
PITG_20250 iy SF
  iy PF
PITG_06356 iy SF
  iy PF
PITG_00982 iy SF
  iy PF
PITG_19220 iy SF
  iy PF
PITG_15195 iy SF
  iy PF
PITG_11466 iy SF
  iy PF
PITG_01559 iy SF
  iy PF
PITG_01302 iy SF
  iy PF
PITG_10815 iy SF
  iy PF
PITG_10525 iy SF
  iy PF
PITG_19177 iy SF
  iy PF
PITG_10769 iy SF
  iy PF
PITG_10767 iy SF
  iy PF
PITG_01388 iy SF
  iy PF
PITG_20637 iy SF
  iy PF
PITG_01306 iy SF
  iy PF
PITG_17894 iy SF
  iy PF
PITG_17750 iy SF
  iy PF
PITG_00050 iy SF
  iy PF
PITG_10768 iy SF
  iy PF
PITG_14515 iy SF
  iy PF
PITG_01307 iy SF
  iy PF
PITG_01387 iy SF
  iy PF
PITG_02480 iy SF
  iy PF
PITG_01305 iy SF
  iy PF
PITG_02453 iy SF
  iy PF No hits
PITG_10209 iy SF
  iy PF
PITG_18634 iy SF
  iy PF
PITG_05280 iy SF
  iy PF
PITG_05586 iy SF
  iy PF
PITG_21294 iy SF
  iy PF
PITG_07059 iy SF
  iy PF
PITG_17018 iy SF
  iy PF
PITG_18680 iy SF
  iy PF
PITG_03948 iy SF
  iy PF
PITG_13252 iy SF
  iy PF No hits
PITG_04908 iy SF
  iy PF
PITG_19413 iy SF
  iy PF
PITG_09753 iy SF
  iy PF
PITG_02329 iy SF
  iy PF
PITG_14820 iy SF
  iy PF
PITG_14828 iy SF
  iy PF
PITG_10083 iy SF
  iy PF
PITG_06075 iy SF
  iy PF
PITG_10664 iy SF
  iy PF