DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Myotis lucifugus 49_1e (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSMLUP00000002511 External link l2 SF
  l2 PF No hits
ENSMLUP00000004218 External link l2 SF
  l2 PF
ENSMLUP00000014828 External link l2 SF
  l2 PF
ENSMLUP00000012109 External link l2 SF
  l2 PF
ENSMLUP00000010461 External link l2 SF
  l2 PF
ENSMLUP00000012812 External link l2 SF
  l2 PF
ENSMLUP00000009157 External link l2 SF
  l2 PF
ENSMLUP00000006896 External link l2 SF
  l2 PF
ENSMLUP00000013349 External link l2 SF
  l2 PF
ENSMLUP00000009395 External link l2 SF
  l2 PF
ENSMLUP00000009455 External link l2 SF
  l2 PF
ENSMLUP00000013292 External link l2 SF
  l2 PF
ENSMLUP00000011466 External link l2 SF
  l2 PF
ENSMLUP00000011224 External link l2 SF
  l2 PF
ENSMLUP00000015159 External link l2 SF
  l2 PF
ENSMLUP00000001836 External link l2 SF
  l2 PF
ENSMLUP00000013716 External link l2 SF
  l2 PF
ENSMLUP00000013493 External link l2 SF
  l2 PF
ENSMLUP00000001260 External link l2 SF
  l2 PF
ENSMLUP00000002097 External link l2 SF
  l2 PF
ENSMLUP00000003544 External link l2 SF
  l2 PF
ENSMLUP00000010096 External link l2 SF
  l2 PF
ENSMLUP00000009411 External link l2 SF
  l2 PF
ENSMLUP00000007884 External link l2 SF
  l2 PF
ENSMLUP00000008123 External link l2 SF
  l2 PF
ENSMLUP00000000843 External link l2 SF
  l2 PF
ENSMLUP00000009530 External link l2 SF
  l2 PF
ENSMLUP00000015417 External link l2 SF
  l2 PF
ENSMLUP00000001602 External link l2 SF
  l2 PF
ENSMLUP00000008556 External link l2 SF
  l2 PF
ENSMLUP00000000089 External link l2 SF
  l2 PF
ENSMLUP00000005028 External link l2 SF
  l2 PF
ENSMLUP00000008578 External link l2 SF
  l2 PF
ENSMLUP00000013490 External link l2 SF
  l2 PF
ENSMLUP00000000328 External link l2 SF
  l2 PF
ENSMLUP00000002269 External link l2 SF
  l2 PF
ENSMLUP00000007124 External link l2 SF
  l2 PF
ENSMLUP00000004458 External link l2 SF
  l2 PF
ENSMLUP00000007686 External link l2 SF
  l2 PF
ENSMLUP00000012090 External link l2 SF
  l2 PF
ENSMLUP00000008764 External link l2 SF
  l2 PF
ENSMLUP00000012914 External link l2 SF
  l2 PF
ENSMLUP00000014404 External link l2 SF
  l2 PF
ENSMLUP00000005277 External link l2 SF
  l2 PF
ENSMLUP00000016088 External link l2 SF
  l2 PF
ENSMLUP00000009653 External link l2 SF
  l2 PF
ENSMLUP00000012574 External link l2 SF
  l2 PF
ENSMLUP00000007387 External link l2 SF
  l2 PF
ENSMLUP00000008448 External link l2 SF
  l2 PF
ENSMLUP00000004577 External link l2 SF
  l2 PF