DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Leishmania infantum JPCM5
Taxonomy: Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmania
source (downloaded: 2007-07-14)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
LinJ35_V3.4020 External link lh SF
  lh PF
LinJ30_V3.3550 External link lh SF
  lh PF
LinJ32_V3.3270 External link lh SF
  lh PF
LinJ30_V3.3570 External link lh SF
  lh PF
LinJ36_V3.3350 External link lh SF
  lh PF
LinJ14_V3.1220 External link lh SF
  lh PF
LinJ31_V3.1360 External link lh SF
  lh PF
LinJ31_V3.1350 External link lh SF
  lh PF No hits
LinJ28_V3.0900 External link lh SF
  lh PF
LinJ19_V3.0180 External link lh SF
  lh PF
LinJ17_V3.0850 External link lh SF
  lh PF
LinJ36_V3.6840 External link lh SF
  lh PF
LinJ25_V3.2290 External link lh SF
  lh PF
LinJ21_V3.0880 External link lh SF No hits
  lh PF
LinJ36_V3.7260 External link lh SF No hits
  lh PF
LinJ29_V3.0620 External link lh SF No hits
  lh PF
LinJ01_V3.0820 External link lh SF No hits
  lh PF
LinJ30_V3.0260 External link lh SF No hits
  lh PF
LinJ30_V3.2260 External link lh SF No hits
  lh PF
LinJ29_V3.0630 External link lh SF No hits
  lh PF
LinJ14_V3.1210 External link lh SF No hits
  lh PF
LinJ29_V3.2630 External link lh SF No hits
  lh PF
LinJ14_V3.0430 External link lh SF No hits
  lh PF
LinJ07_V3.1240 External link lh SF No hits
  lh PF