DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Myotis lucifugus 49_1e (all transcripts)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Vespertilionidae; Myotis
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSMLUP00000002511 External link lu SF
  lu PF No hits
ENSMLUP00000004218 External link lu SF
  lu PF
ENSMLUP00000012109 External link lu SF
  lu PF
ENSMLUP00000010461 External link lu SF
  lu PF
ENSMLUP00000014828 External link lu SF
  lu PF
ENSMLUP00000012812 External link lu SF
  lu PF
ENSMLUP00000009157 External link lu SF
  lu PF
ENSMLUP00000006896 External link lu SF
  lu PF
ENSMLUP00000013349 External link lu SF
  lu PF
ENSMLUP00000009395 External link lu SF
  lu PF
ENSMLUP00000009455 External link lu SF
  lu PF
ENSMLUP00000011466 External link lu SF
  lu PF
ENSMLUP00000013292 External link lu SF
  lu PF
ENSMLUP00000011224 External link lu SF
  lu PF
ENSMLUP00000015159 External link lu SF
  lu PF
ENSMLUP00000001836 External link lu SF
  lu PF
ENSMLUP00000013716 External link lu SF
  lu PF
ENSMLUP00000001260 External link lu SF
  lu PF
ENSMLUP00000013493 External link lu SF
  lu PF
ENSMLUP00000002097 External link lu SF
  lu PF
ENSMLUP00000003544 External link lu SF
  lu PF
ENSMLUP00000010096 External link lu SF
  lu PF
ENSMLUP00000007884 External link lu SF
  lu PF
ENSMLUP00000009411 External link lu SF
  lu PF
ENSMLUP00000008123 External link lu SF
  lu PF
ENSMLUP00000001602 External link lu SF
  lu PF
ENSMLUP00000009530 External link lu SF
  lu PF
ENSMLUP00000015417 External link lu SF
  lu PF
ENSMLUP00000000843 External link lu SF
  lu PF
ENSMLUP00000008556 External link lu SF
  lu PF
ENSMLUP00000008578 External link lu SF
  lu PF
ENSMLUP00000000089 External link lu SF
  lu PF
ENSMLUP00000005028 External link lu SF
  lu PF
ENSMLUP00000013490 External link lu SF
  lu PF
ENSMLUP00000000328 External link lu SF
  lu PF
ENSMLUP00000004577 External link lu SF
  lu PF
ENSMLUP00000010675 External link lu SF
  lu PF
ENSMLUP00000007124 External link lu SF
  lu PF
ENSMLUP00000000832 External link lu SF
  lu PF
ENSMLUP00000012090 External link lu SF
  lu PF
ENSMLUP00000012914 External link lu SF
  lu PF
ENSMLUP00000007387 External link lu SF
  lu PF
ENSMLUP00000007686 External link lu SF
  lu PF
ENSMLUP00000012885 External link lu SF
  lu PF
ENSMLUP00000005277 External link lu SF
  lu PF
ENSMLUP00000014404 External link lu SF
  lu PF
ENSMLUP00000013090 External link lu SF
  lu PF
ENSMLUP00000016088 External link lu SF
  lu PF
ENSMLUP00000009653 External link lu SF
  lu PF
ENSMLUP00000008764 External link lu SF
  lu PF