DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Lodderomyces elongisporus NRRL YB-4239
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Lodderomyces
source (downloaded: 2007-05-21)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
LELG_01427 ly SF
  ly PF
LELG_05523 ly SF
  ly PF
LELG_03555 ly SF
  ly PF
LELG_03603 ly SF
  ly PF
LELG_04045 ly SF
  ly PF
LELG_02325 ly SF
  ly PF
LELG_05650 ly SF
  ly PF
LELG_00353 ly SF
  ly PF
LELG_01761 ly SF
  ly PF
LELG_00583 ly SF
  ly PF
LELG_00014 ly SF
  ly PF
LELG_01997 ly SF
  ly PF
LELG_01756 ly SF
  ly PF
LELG_04970 ly SF
  ly PF
LELG_00073 ly SF
  ly PF
LELG_04177 ly SF
  ly PF
LELG_00655 ly SF
  ly PF
LELG_01337 ly SF
  ly PF
LELG_01533 ly SF
  ly PF
LELG_03488 ly SF
  ly PF
LELG_02329 ly SF
  ly PF
LELG_01397 ly SF
  ly PF
LELG_03818 ly SF
  ly PF
LELG_03670 ly SF
  ly PF
LELG_00217 ly SF
  ly PF
LELG_05293 ly SF
  ly PF
LELG_02766 ly SF
  ly PF
LELG_00683 ly SF
  ly PF
LELG_00816 ly SF
  ly PF
LELG_03760 ly SF
  ly PF
LELG_04135 ly SF
  ly PF
LELG_02824 ly SF
  ly PF
LELG_03208 ly SF
  ly PF
LELG_04374 ly SF
  ly PF
LELG_00946 ly SF
  ly PF
LELG_03882 ly SF
  ly PF
LELG_03328 ly SF
  ly PF
LELG_03589 ly SF
  ly PF
LELG_02901 ly SF
  ly PF
LELG_03276 ly SF
  ly PF
LELG_02863 ly SF
  ly PF
LELG_03812 ly SF
  ly PF
LELG_02213 ly SF
  ly PF
LELG_00667 ly SF
  ly PF
LELG_02218 ly SF
  ly PF
LELG_05736 ly SF
  ly PF
LELG_02769 ly SF
  ly PF
LELG_02955 ly SF
  ly PF
LELG_00889 ly SF
  ly PF
LELG_03761 ly SF
  ly PF