DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Cryptococcus neoformans B-3501A
Taxonomy: Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Tremellaceae; Filobasidiella
source (downloaded: 2008-01-12)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
sgtc|cn07249 n1 SF
  n1 PF
sgtc|cn07413 n1 SF
  n1 PF
sgtc|cn03091 n1 SF
  n1 PF
sgtc|cn09215 n1 SF
  n1 PF
sgtc|cn07298 n1 SF
  n1 PF
sgtc|cn01029 n1 SF
  n1 PF
sgtc|cn01182 n1 SF
  n1 PF
sgtc|cn08388 n1 SF
  n1 PF
sgtc|cn02536 n1 SF
  n1 PF
sgtc|cn11130 n1 SF
  n1 PF
sgtc|cn01485 n1 SF
  n1 PF No hits
sgtc|cn10061 n1 SF
  n1 PF
sgtc|cn08143 n1 SF
  n1 PF
sgtc|cn05002 n1 SF
  n1 PF
sgtc|cn04041 n1 SF
  n1 PF No hits
sgtc|cn13070 n1 SF
  n1 PF
sgtc|cn05089 n1 SF
  n1 PF
sgtc|cn04607 n1 SF
  n1 PF
sgtc|cn01638 n1 SF
  n1 PF
sgtc|cn10322 n1 SF
  n1 PF
sgtc|cn02078 n1 SF
  n1 PF
sgtc|cn01476 n1 SF
  n1 PF
sgtc|cn05229 n1 SF
  n1 PF
sgtc|cn14011 n1 SF
  n1 PF
sgtc|cn08181 n1 SF
  n1 PF
sgtc|cn05186 n1 SF
  n1 PF
sgtc|cn08313 n1 SF
  n1 PF
sgtc|cn10046 n1 SF
  n1 PF
sgtc|cn02185 n1 SF
  n1 PF
sgtc|cn05079 n1 SF
  n1 PF
sgtc|cn02335 n1 SF
  n1 PF
sgtc|cn10151 n1 SF
  n1 PF
sgtc|cn03377 n1 SF
  n1 PF
sgtc|cn12047 n1 SF
  n1 PF
sgtc|cn06333 n1 SF
  n1 PF
sgtc|cn02191 n1 SF
  n1 PF
sgtc|cn02173 n1 SF
  n1 PF
sgtc|cn01022 n1 SF
  n1 PF
sgtc|cn08195 n1 SF
  n1 PF
sgtc|cn07438 n1 SF
  n1 PF
sgtc|cn02068 n1 SF
  n1 PF
sgtc|cn02305 n1 SF
  n1 PF
sgtc|cn09085 n1 SF
  n1 PF
sgtc|cn09228 n1 SF
  n1 PF
sgtc|cn10027 n1 SF
  n1 PF
sgtc|cn01813 n1 SF
  n1 PF
sgtc|cn01200 n1 SF
  n1 PF
sgtc|cn13147 n1 SF
  n1 PF
sgtc|cn09304 n1 SF
  n1 PF
sgtc|cn02007 n1 SF
  n1 PF