DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Ornithorhynchus anatinus 49_1f (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSOANP00000011446 External link o2 SF
  o2 PF
ENSOANP00000015365 External link o2 SF
  o2 PF No hits
ENSOANP00000004394 External link o2 SF
  o2 PF
ENSOANP00000013188 External link o2 SF
  o2 PF
ENSOANP00000021968 External link o2 SF
  o2 PF
ENSOANP00000020956 External link o2 SF
  o2 PF
ENSOANP00000003995 External link o2 SF
  o2 PF
ENSOANP00000023793 External link o2 SF
  o2 PF
ENSOANP00000024545 External link o2 SF
  o2 PF
ENSOANP00000009778 External link o2 SF
  o2 PF
ENSOANP00000007829 External link o2 SF
  o2 PF
ENSOANP00000022605 External link o2 SF
  o2 PF
ENSOANP00000011687 External link o2 SF
  o2 PF
ENSOANP00000027533 External link o2 SF
  o2 PF
ENSOANP00000012799 External link o2 SF
  o2 PF
ENSOANP00000021369 External link o2 SF
  o2 PF
ENSOANP00000010058 External link o2 SF
  o2 PF
ENSOANP00000019030 External link o2 SF
  o2 PF
ENSOANP00000008227 External link o2 SF
  o2 PF
ENSOANP00000012025 External link o2 SF
  o2 PF
ENSOANP00000001534 External link o2 SF
  o2 PF
ENSOANP00000020980 External link o2 SF
  o2 PF
ENSOANP00000003175 External link o2 SF
  o2 PF
ENSOANP00000024296 External link o2 SF
  o2 PF
ENSOANP00000022130 External link o2 SF
  o2 PF
ENSOANP00000007896 External link o2 SF
  o2 PF
ENSOANP00000013945 External link o2 SF
  o2 PF
ENSOANP00000017986 External link o2 SF
  o2 PF
ENSOANP00000019365 External link o2 SF
  o2 PF
ENSOANP00000009765 External link o2 SF
  o2 PF
ENSOANP00000010162 External link o2 SF
  o2 PF
ENSOANP00000008878 External link o2 SF
  o2 PF
ENSOANP00000011741 External link o2 SF
  o2 PF
ENSOANP00000018466 External link o2 SF
  o2 PF
ENSOANP00000019813 External link o2 SF
  o2 PF
ENSOANP00000010553 External link o2 SF
  o2 PF
ENSOANP00000013603 External link o2 SF
  o2 PF
ENSOANP00000016631 External link o2 SF
  o2 PF
ENSOANP00000010037 External link o2 SF
  o2 PF
ENSOANP00000005607 External link o2 SF
  o2 PF
ENSOANP00000006190 External link o2 SF
  o2 PF
ENSOANP00000009152 External link o2 SF
  o2 PF
ENSOANP00000010001 External link o2 SF
  o2 PF
ENSOANP00000019364 External link o2 SF
  o2 PF
ENSOANP00000018057 External link o2 SF
  o2 PF
ENSOANP00000008376 External link o2 SF
  o2 PF
ENSOANP00000019533 External link o2 SF
  o2 PF
ENSOANP00000016523 External link o2 SF
  o2 PF
ENSOANP00000020431 External link o2 SF
  o2 PF
ENSOANP00000007144 External link o2 SF
  o2 PF No hits