DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Otolemur garnettii 49_1c (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSOGAP00000007058 External link o4 SF
  o4 PF
ENSOGAP00000010895 External link o4 SF
  o4 PF
ENSOGAP00000010735 External link o4 SF
  o4 PF
ENSOGAP00000001779 External link o4 SF
  o4 PF
ENSOGAP00000013246 External link o4 SF
  o4 PF
ENSOGAP00000000690 External link o4 SF
  o4 PF
ENSOGAP00000012568 External link o4 SF
  o4 PF
ENSOGAP00000006760 External link o4 SF
  o4 PF
ENSOGAP00000004949 External link o4 SF
  o4 PF
ENSOGAP00000001237 External link o4 SF
  o4 PF
ENSOGAP00000007914 External link o4 SF
  o4 PF
ENSOGAP00000005754 External link o4 SF
  o4 PF
ENSOGAP00000006230 External link o4 SF
  o4 PF
ENSOGAP00000001456 External link o4 SF
  o4 PF
ENSOGAP00000005542 External link o4 SF
  o4 PF
ENSOGAP00000012969 External link o4 SF
  o4 PF
ENSOGAP00000002066 External link o4 SF
  o4 PF
ENSOGAP00000000381 External link o4 SF
  o4 PF
ENSOGAP00000006293 External link o4 SF
  o4 PF
ENSOGAP00000013167 External link o4 SF
  o4 PF
ENSOGAP00000000184 External link o4 SF
  o4 PF
ENSOGAP00000012663 External link o4 SF
  o4 PF
ENSOGAP00000001477 External link o4 SF
  o4 PF
ENSOGAP00000003672 External link o4 SF
  o4 PF
ENSOGAP00000003122 External link o4 SF
  o4 PF
ENSOGAP00000003136 External link o4 SF
  o4 PF
ENSOGAP00000010134 External link o4 SF
  o4 PF
ENSOGAP00000001035 External link o4 SF
  o4 PF
ENSOGAP00000014383 External link o4 SF
  o4 PF
ENSOGAP00000012351 External link o4 SF
  o4 PF
ENSOGAP00000010189 External link o4 SF
  o4 PF
ENSOGAP00000014117 External link o4 SF
  o4 PF
ENSOGAP00000012129 External link o4 SF
  o4 PF
ENSOGAP00000007053 External link o4 SF
  o4 PF
ENSOGAP00000010578 External link o4 SF
  o4 PF
ENSOGAP00000000567 External link o4 SF
  o4 PF
ENSOGAP00000012570 External link o4 SF
  o4 PF
ENSOGAP00000006284 External link o4 SF
  o4 PF
ENSOGAP00000009539 External link o4 SF
  o4 PF
ENSOGAP00000002130 External link o4 SF
  o4 PF
ENSOGAP00000012544 External link o4 SF
  o4 PF
ENSOGAP00000013260 External link o4 SF
  o4 PF
ENSOGAP00000002662 External link o4 SF
  o4 PF
ENSOGAP00000006589 External link o4 SF
  o4 PF
ENSOGAP00000005378 External link o4 SF
  o4 PF
ENSOGAP00000004900 External link o4 SF
  o4 PF
ENSOGAP00000001094 External link o4 SF
  o4 PF
ENSOGAP00000002995 External link o4 SF
  o4 PF
ENSOGAP00000008923 External link o4 SF
  o4 PF
ENSOGAP00000001352 External link o4 SF
  o4 PF