DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Schizosaccharomyces octosporus yFS286
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
source (downloaded: 2008-08-29)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
SOCG_02434 o9 SF
  o9 PF
SOCG_02811 o9 SF
  o9 PF
SOCG_02446 o9 SF
  o9 PF
SOCG_03938 o9 SF
  o9 PF
SOCG_03975 o9 SF
  o9 PF
SOCG_04128 o9 SF
  o9 PF
SOCG_02794 o9 SF
  o9 PF
SOCG_03704 o9 SF
  o9 PF
SOCG_02629 o9 SF
  o9 PF
SOCG_00244 o9 SF
  o9 PF
SOCG_01699 o9 SF
  o9 PF
SOCG_02145 o9 SF
  o9 PF
SOCG_01715 o9 SF
  o9 PF
SOCG_01851 o9 SF
  o9 PF
SOCG_04895 o9 SF
  o9 PF
SOCG_01945 o9 SF
  o9 PF
SOCG_02984 o9 SF
  o9 PF
SOCG_01324 o9 SF
  o9 PF
SOCG_04394 o9 SF
  o9 PF
SOCG_04605 o9 SF
  o9 PF
SOCG_00996 o9 SF
  o9 PF
SOCG_04888 o9 SF
  o9 PF
SOCG_01113 o9 SF
  o9 PF
SOCG_02642 o9 SF
  o9 PF
SOCG_04644 o9 SF
  o9 PF
SOCG_02136 o9 SF
  o9 PF
SOCG_04337 o9 SF
  o9 PF
SOCG_01079 o9 SF
  o9 PF
SOCG_01889 o9 SF
  o9 PF
SOCG_00864 o9 SF
  o9 PF
SOCG_03212 o9 SF
  o9 PF
SOCG_03341 o9 SF
  o9 PF
SOCG_02047 o9 SF
  o9 PF
SOCG_00359 o9 SF
  o9 PF
SOCG_04877 o9 SF
  o9 PF
SOCG_00953 o9 SF
  o9 PF
SOCG_02976 o9 SF
  o9 PF
SOCG_00472 o9 SF
  o9 PF
SOCG_02266 o9 SF
  o9 PF
SOCG_01292 o9 SF
  o9 PF No hits
SOCG_00311 o9 SF
  o9 PF
SOCG_01086 o9 SF
  o9 PF
SOCG_03325 o9 SF
  o9 PF
SOCG_03181 o9 SF
  o9 PF
SOCG_00995 o9 SF
  o9 PF
SOCG_04002 o9 SF
  o9 PF No hits
SOCG_03749 o9 SF
  o9 PF No hits
SOCG_03419 o9 SF
  o9 PF
SOCG_03639 o9 SF
  o9 PF
SOCG_01245 o9 SF
  o9 PF