DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Ornithorhynchus anatinus 49_1f (all transcripts)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
source (downloaded: 2008-03-21)

The all transcripts genomes include all the transcripts for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSOANP00000015365 External link oh SF
  oh PF No hits
ENSOANP00000011446 External link oh SF
  oh PF
ENSOANP00000004396 External link oh SF
  oh PF
ENSOANP00000021969 External link oh SF
  oh PF
ENSOANP00000013189 External link oh SF
  oh PF
ENSOANP00000020956 External link oh SF
  oh PF
ENSOANP00000013188 External link oh SF
  oh PF
ENSOANP00000004394 External link oh SF
  oh PF
ENSOANP00000021968 External link oh SF
  oh PF
ENSOANP00000003996 External link oh SF
  oh PF
ENSOANP00000003995 External link oh SF
  oh PF
ENSOANP00000023793 External link oh SF
  oh PF
ENSOANP00000024546 External link oh SF
  oh PF
ENSOANP00000024545 External link oh SF
  oh PF
ENSOANP00000007831 External link oh SF
  oh PF
ENSOANP00000009781 External link oh SF
  oh PF
ENSOANP00000007829 External link oh SF
  oh PF
ENSOANP00000009778 External link oh SF
  oh PF
ENSOANP00000007830 External link oh SF
  oh PF
ENSOANP00000022605 External link oh SF
  oh PF
ENSOANP00000022606 External link oh SF
  oh PF
ENSOANP00000011687 External link oh SF
  oh PF
ENSOANP00000011688 External link oh SF
  oh PF
ENSOANP00000009308 External link oh SF
  oh PF
ENSOANP00000023139 External link oh SF
  oh PF
ENSOANP00000027533 External link oh SF
  oh PF
ENSOANP00000027532 External link oh SF
  oh PF
ENSOANP00000023137 External link oh SF
  oh PF
ENSOANP00000012800 External link oh SF
  oh PF
ENSOANP00000012799 External link oh SF
  oh PF
ENSOANP00000010058 External link oh SF
  oh PF
ENSOANP00000019031 External link oh SF
  oh PF
ENSOANP00000019030 External link oh SF
  oh PF
ENSOANP00000021372 External link oh SF
  oh PF
ENSOANP00000008227 External link oh SF
  oh PF
ENSOANP00000021369 External link oh SF
  oh PF
ENSOANP00000021371 External link oh SF
  oh PF
ENSOANP00000003177 External link oh SF
  oh PF
ENSOANP00000020980 External link oh SF
  oh PF
ENSOANP00000003176 External link oh SF
  oh PF
ENSOANP00000003175 External link oh SF
  oh PF
ENSOANP00000003174 External link oh SF
  oh PF
ENSOANP00000012025 External link oh SF
  oh PF
ENSOANP00000001534 External link oh SF
  oh PF
ENSOANP00000007896 External link oh SF
  oh PF
ENSOANP00000022130 External link oh SF
  oh PF
ENSOANP00000024296 External link oh SF
  oh PF
ENSOANP00000007898 External link oh SF
  oh PF
ENSOANP00000013945 External link oh SF
  oh PF
ENSOANP00000010001 External link oh SF
  oh PF