DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Sorghum bicolor
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Sorghum
source (downloaded: 2008-03-27)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Sorbi1|5049421|Sb01g035360 External link oj SF
  oj PF
jgi|Sorbi1|5056391|Sb05g003900 External link oj SF
  oj PF
jgi|Sorbi1|5059365|Sb08g004000 External link oj SF
  oj PF
jgi|Sorbi1|5060792|Sb09g025430 External link oj SF
  oj PF
jgi|Sorbi1|5060335|Sb09g016200 External link oj SF
  oj PF
jgi|Sorbi1|5032240|Sb10g029285 External link oj SF
  oj PF
jgi|Sorbi1|5054647|Sb04g003020 External link oj SF
  oj PF
jgi|Sorbi1|5059741|Sb08g019950 External link oj SF
  oj PF
jgi|Sorbi1|5053702|Sb03g034510 External link oj SF
  oj PF
jgi|Sorbi1|5054671|Sb04g003450 External link oj SF
  oj PF
jgi|Sorbi1|5062361|Sb01g014480 External link oj SF
  oj PF
jgi|Sorbi1|5059196|Sb08g000380 External link oj SF
  oj PF
jgi|Sorbi1|5034802|Sb02g042000 External link oj SF
  oj PF
jgi|Sorbi1|5056227|Sb05g000360 External link oj SF
  oj PF
jgi|Sorbi1|5061596|Sb10g009070 External link oj SF
  oj PF
jgi|Sorbi1|5028199|Sb01g005940 External link oj SF
  oj PF
jgi|Sorbi1|5044597|Sb08g004360 External link oj SF
  oj PF
jgi|Sorbi1|5059378|Sb08g004340 External link oj SF
  oj PF
jgi|Sorbi1|5055895|Sb04g033450 External link oj SF
  oj PF
jgi|Sorbi1|5029028|Sb01g020090 External link oj SF
  oj PF
jgi|Sorbi1|5045586|Sb08g022276 External link oj SF
  oj PF
jgi|Sorbi1|5044599|Sb08g004370 External link oj SF
  oj PF
jgi|Sorbi1|5045927|Sb09g004315 External link oj SF
  oj PF
jgi|Sorbi1|5046868|Sb09g025950 External link oj SF
  oj PF
jgi|Sorbi1|5047988|Sb01g005690 External link oj SF
  oj PF
jgi|Sorbi1|5054477|Sb03g047520 External link oj SF
  oj PF
jgi|Sorbi1|5062391|Sb06g023940 External link oj SF
  oj PF
jgi|Sorbi1|5049073|Sb01g029170 External link oj SF
  oj PF
jgi|Sorbi1|5047025|Sb09g028850 External link oj SF
  oj PF
jgi|Sorbi1|5036376|Sb03g030310 External link oj SF
  oj PF
jgi|Sorbi1|5047065|Sb09g029510 External link oj SF
  oj PF
jgi|Sorbi1|5037824|Sb04g007750 External link oj SF
  oj PF
jgi|Sorbi1|5056086|Sb04g036520 External link oj SF
  oj PF
jgi|Sorbi1|5036634|Sb03g034360 External link oj SF
  oj PF
jgi|Sorbi1|5028503|Sb01g011980 External link oj SF
  oj PF
jgi|Sorbi1|5037463|Sb04g002090 External link oj SF
  oj PF
jgi|Sorbi1|5037464|Sb04g002093 External link oj SF
  oj PF
jgi|Sorbi1|5028344|Sb01g008950 External link oj SF
  oj PF
jgi|Sorbi1|5048383|Sb01g011840 External link oj SF
  oj PF
jgi|Sorbi1|5053085|Sb03g013700 External link oj SF
  oj PF
jgi|Sorbi1|5057619|Sb06g024200 External link oj SF
  oj PF
jgi|Sorbi1|5039425|Sb05g001890 External link oj SF
  oj PF
jgi|Sorbi1|5047779|Sb01g002270 External link oj SF
  oj PF
jgi|Sorbi1|5061842|Sb10g022580 External link oj SF
  oj PF
jgi|Sorbi1|5059941|Sb09g000820 External link oj SF
  oj PF
jgi|Sorbi1|5055246|Sb04g022470 External link oj SF
  oj PF
jgi|Sorbi1|5034931|Sb03g000300 External link oj SF
  oj PF
jgi|Sorbi1|5058941|Sb07g024550 External link oj SF
  oj PF
jgi|Sorbi1|5047212|Sb0011s007570 External link oj SF
  oj PF
jgi|Sorbi1|5030481|Sb01g047010 External link oj SF
  oj PF