DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Bombyx mori
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombyx
source (downloaded: 2007-01-12)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
Bmb000011 External link om SF
  om PF
Bmb009414 External link om SF
  om PF
Bmb000485 External link om SF
  om PF
Bmb010071 External link om SF
  om PF
Bmb030109 External link om SF
  om PF
Bmb032589 External link om SF
  om PF
Bmb034897 External link om SF
  om PF
Bmb009794 External link om SF
  om PF
Bmb001225 External link om SF
  om PF
Bmb017530 External link om SF
  om PF
Bmb029396 External link om SF
  om PF
Bmb001601 External link om SF
  om PF
Bmb020630 External link om SF
  om PF
Bmb035949 External link om SF
  om PF
Bmb014140 External link om SF
  om PF
Bmb028843 External link om SF
  om PF
Bmb016055 External link om SF
  om PF
Bmb007216 External link om SF
  om PF
Bmb015738 External link om SF
  om PF
Bmb007146 External link om SF
  om PF
Bmb014960 External link om SF
  om PF
Bmb039995 External link om SF
  om PF
Bmb008416 External link om SF
  om PF
Bmb026355 External link om SF
  om PF
Bmb003313 External link om SF
  om PF
Bmb018415 External link om SF
  om PF
Bmb027685 External link om SF
  om PF
Bmb021404 External link om SF
  om PF
Bmb003312 External link om SF
  om PF
Bmb041273 External link om SF
  om PF
Bmb000006 External link om SF
  om PF
Bmb034116 External link om SF
  om PF
Bmb034816 External link om SF
  om PF
Bmb001583 External link om SF
  om PF
Bmb024437 External link om SF
  om PF
Bmb023636 External link om SF
  om PF
Bmb006433 External link om SF
  om PF
Bmb019097 External link om SF
  om PF
Bmb026465 External link om SF
  om PF
Bmb005497 External link om SF
  om PF
Bmb035950 External link om SF
  om PF
Bmb001473 External link om SF
  om PF
Bmb007428 External link om SF
  om PF
Bmb002333 External link om SF
  om PF
Bmb017356 External link om SF
  om PF
Bmb031555 External link om SF
  om PF
Bmb011000 External link om SF
  om PF
Bmb016749 External link om SF
  om PF
Bmb004098 External link om SF
  om PF
Bmb026055 External link om SF
  om PF