DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Puccinia graminis f. sp. tritici CRL 75-36-700-3
Taxonomy: Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia
source (downloaded: 2007-07-14)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
PGTG_10240 p4 SF
  p4 PF No hits
PGTG_08759 p4 SF
  p4 PF No hits
PGTG_01571 p4 SF
  p4 PF
PGTG_14141 p4 SF
  p4 PF No hits
PGTG_02717 p4 SF
  p4 PF
PGTG_04061 p4 SF
  p4 PF
PGTG_06212 p4 SF
  p4 PF
PGTG_19721 p4 SF
  p4 PF
PGTG_09159 p4 SF
  p4 PF
PGTG_13577 p4 SF
  p4 PF
PGTG_18161 p4 SF
  p4 PF
PGTG_07189 p4 SF
  p4 PF
PGTG_10231 p4 SF
  p4 PF
PGTG_06406 p4 SF
  p4 PF
PGTG_15723 p4 SF
  p4 PF
PGTG_07899 p4 SF
  p4 PF
PGTG_06371 p4 SF
  p4 PF
PGTG_18397 p4 SF
  p4 PF
PGTG_09439 p4 SF
  p4 PF No hits
PGTG_09730 p4 SF
  p4 PF
PGTG_10235 p4 SF
  p4 PF
PGTG_14295 p4 SF
  p4 PF
PGTG_19275 p4 SF
  p4 PF
PGTG_10216 p4 SF
  p4 PF
PGTG_13157 p4 SF
  p4 PF
PGTG_08417 p4 SF
  p4 PF
PGTG_10237 p4 SF
  p4 PF
PGTG_10728 p4 SF
  p4 PF
PGTG_01901 p4 SF
  p4 PF
PGTG_01502 p4 SF
  p4 PF
PGTG_04650 p4 SF
  p4 PF
PGTG_01351 p4 SF
  p4 PF
PGTG_09162 p4 SF
  p4 PF
PGTG_07823 p4 SF
  p4 PF
PGTG_01851 p4 SF
  p4 PF
PGTG_05723 p4 SF
  p4 PF
PGTG_09859 p4 SF
  p4 PF
PGTG_01682 p4 SF
  p4 PF
PGTG_08173 p4 SF
  p4 PF
PGTG_07290 p4 SF
  p4 PF
PGTG_01602 p4 SF
  p4 PF
PGTG_02666 p4 SF
  p4 PF
PGTG_17150 p4 SF
  p4 PF
PGTG_18171 p4 SF
  p4 PF
PGTG_19491 p4 SF
  p4 PF
PGTG_03532 p4 SF
  p4 PF
PGTG_15718 p4 SF
  p4 PF
PGTG_14399 p4 SF
  p4 PF
PGTG_09207 p4 SF
  p4 PF
PGTG_11888 p4 SF
  p4 PF No hits