DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Schizosaccharomyces pombe
Taxonomy: Eukaryota; Fungi; Ascomycota; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
source (downloaded: 2008-04-29)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
SPAC1687.05 External link po SF
  po PF
SPAC343.11c External link po SF
  po PF
SPAC31A2.11c External link po SF
  po PF
SPCC584.02 External link po SF
  po PF
SPCC18.03 External link po SF
  po PF
SPCC1393.08 External link po SF
  po PF
SPAC23E2.01 External link po SF
  po PF
SPCC290.04 External link po SF
  po PF
SPCC16A11.14 External link po SF
  po PF
SPCC1902.01 External link po SF
  po PF
SPBC1773.16c External link po SF
  po PF
SPAC11D3.07c External link po SF
  po PF
SPAC3C7.04 External link po SF
  po PF
SPCC417.09c External link po SF
  po PF
SPCC777.02 External link po SF
  po PF
SPAC3H8.08c External link po SF
  po PF
SPAC821.07c External link po SF
  po PF
SPCC757.04 External link po SF
  po PF
SPCC965.10 External link po SF
  po PF
SPBC16G5.16 External link po SF
  po PF
SPAPB1A11.04c External link po SF
  po PF
SPAC2H10.01 External link po SF
  po PF
SPCC320.03 External link po SF
  po PF
SPBC1773.12 External link po SF
  po PF
SPBPB8B6.04c External link po SF
  po PF
SPAC139.03 External link po SF
  po PF
SPBC530.08 External link po SF
  po PF
SPAC1486.10 External link po SF
  po PF
SPBC1683.13c External link po SF
  po PF
SPAPB24D3.01 External link po SF
  po PF
SPAC25B8.11 External link po SF
  po PF
SPAC1399.05c External link po SF
  po PF
SPBC15D4.02 External link po SF
  po PF
SPAC1327.01c External link po SF
  po PF
SPAC1F7.11c External link po SF
  po PF
SPBC16G5.17 External link po SF
  po PF
SPBC27B12.11c External link po SF
  po PF
SPBP8B7.30c External link po SF
  po PF
SPBC530.05 External link po SF
  po PF
SPAC144.02 External link po SF
  po PF
SPBC1198.04c External link po SF
  po PF
SPBC1D7.02c External link po SF
  po PF
SPAC25B8.19c External link po SF
  po PF
SPAC11D3.17 External link po SF
  po PF
SPAC3H1.11 External link po SF
  po PF
SPAC4G8.13c External link po SF
  po PF
SPAC6F12.02 External link po SF
  po PF
SPAC1039.05c External link po SF
  po PF
SPAC144.09c External link po SF
  po PF
SPAC6G10.12c External link po SF
  po PF