DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Acyrthosiphon pisum
Taxonomy: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidiformes; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
source (downloaded: 2011-02-07)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ACYPI001067-PA External link qp SF
  qp PF
ACYPI004122-PA External link qp SF
  qp PF
ACYPI007850-PA External link qp SF
  qp PF
ACYPI43968-PA External link qp SF
  qp PF
ACYPI23949-PA External link qp SF
  qp PF
ACYPI27763-PA External link qp SF
  qp PF
ACYPI45936-PA External link qp SF
  qp PF
ACYPI45529-PA External link qp SF
  qp PF
ACYPI31177-PA External link qp SF
  qp PF
ACYPI45428-PA External link qp SF
  qp PF
ACYPI29273-PA External link qp SF
  qp PF
ACYPI20685-PA External link qp SF
  qp PF
ACYPI27009-PA External link qp SF
  qp PF
ACYPI34776-PA External link qp SF
  qp PF
ACYPI29974-PA External link qp SF
  qp PF
ACYPI005878-PA External link qp SF
  qp PF
ACYPI008086-PA External link qp SF
  qp PF
ACYPI003301-PA External link qp SF
  qp PF
ACYPI000099-PA External link qp SF
  qp PF
ACYPI006222-PA External link qp SF
  qp PF
ACYPI49667-PA External link qp SF
  qp PF
ACYPI004965-PA External link qp SF
  qp PF
ACYPI002357-PA External link qp SF
  qp PF
ACYPI005767-PA External link qp SF
  qp PF
ACYPI35058-PA External link qp SF
  qp PF
ACYPI006590-PA External link qp SF
  qp PF
ACYPI007513-PA External link qp SF
  qp PF
ACYPI000420-PA External link qp SF
  qp PF
ACYPI54631-PA External link qp SF
  qp PF
ACYPI005026-PA External link qp SF
  qp PF
ACYPI005445-PA External link qp SF
  qp PF
ACYPI007337-PA External link qp SF
  qp PF
ACYPI000398-PA External link qp SF
  qp PF
ACYPI007424-PA External link qp SF
  qp PF
ACYPI000502-PA External link qp SF
  qp PF
ACYPI006883-PA External link qp SF
  qp PF
ACYPI001275-PA External link qp SF
  qp PF
ACYPI51211-PA External link qp SF
  qp PF
ACYPI005031-PA External link qp SF
  qp PF
ACYPI005162-PA External link qp SF
  qp PF
ACYPI008232-PA External link qp SF
  qp PF
ACYPI25870-PA External link qp SF
  qp PF
ACYPI21672-PA External link qp SF
  qp PF
ACYPI001074-PA External link qp SF
  qp PF
ACYPI008250-PA External link qp SF
  qp PF
ACYPI003717-PA External link qp SF
  qp PF
ACYPI34470-PA External link qp SF
  qp PF
ACYPI48735-PA External link qp SF
  qp PF
ACYPI003127-PA External link qp SF
  qp PF
ACYPI004234-PA External link qp SF
  qp PF