DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Saccharomyces cerevisiae RM11-1a
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
source (downloaded: 2008-01-09)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
SCRG_00123 r5 SF
  r5 PF
SCRG_01548 r5 SF
  r5 PF
SCRG_01157 r5 SF
  r5 PF
SCRG_01917 r5 SF
  r5 PF
SCRG_02498 r5 SF
  r5 PF
SCRG_03843 r5 SF
  r5 PF
SCRG_05001 r5 SF
  r5 PF
SCRG_02469 r5 SF
  r5 PF
SCRG_05414 r5 SF
  r5 PF
SCRG_02027 r5 SF
  r5 PF
SCRG_03561 r5 SF
  r5 PF
SCRG_04051 r5 SF
  r5 PF
SCRG_04510 r5 SF
  r5 PF
SCRG_05166 r5 SF
  r5 PF
SCRG_02731 r5 SF
  r5 PF
SCRG_01738 r5 SF
  r5 PF
SCRG_01021 r5 SF
  r5 PF
SCRG_04890 r5 SF
  r5 PF
SCRG_00113 r5 SF
  r5 PF
SCRG_01801 r5 SF
  r5 PF
SCRG_03809 r5 SF
  r5 PF
SCRG_03568 r5 SF
  r5 PF
SCRG_03467 r5 SF
  r5 PF
SCRG_02674 r5 SF
  r5 PF
SCRG_04658 r5 SF
  r5 PF
SCRG_02967 r5 SF
  r5 PF
SCRG_05302 r5 SF
  r5 PF
SCRG_03477 r5 SF
  r5 PF
SCRG_04118 r5 SF
  r5 PF
SCRG_05082 r5 SF
  r5 PF
SCRG_00310 r5 SF
  r5 PF
SCRG_04767 r5 SF
  r5 PF
SCRG_02176 r5 SF
  r5 PF
SCRG_04079 r5 SF
  r5 PF
SCRG_04388 r5 SF
  r5 PF
SCRG_00478 r5 SF
  r5 PF
SCRG_01822 r5 SF
  r5 PF No hits
SCRG_05686 r5 SF
  r5 PF
SCRG_03027 r5 SF
  r5 PF
SCRG_04229 r5 SF
  r5 PF
SCRG_02362 r5 SF
  r5 PF
SCRG_00023 r5 SF
  r5 PF
SCRG_04004 r5 SF
  r5 PF
SCRG_03079 r5 SF
  r5 PF
SCRG_00736 r5 SF
  r5 PF
SCRG_02059 r5 SF
  r5 PF
SCRG_01315 r5 SF
  r5 PF
SCRG_05492 r5 SF
  r5 PF
SCRG_05155 r5 SF
  r5 PF
SCRG_00663 r5 SF
  r5 PF