DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Tupaia belangeri 49_1d (longest transcript per gene)
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
source (downloaded: 2008-03-21)

The longest transcript per gene genomes use the longest transcript as the single representative protein for each gene.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
ENSTBEP00000006823 External link t2 SF
  t2 PF
ENSTBEP00000005309 External link t2 SF
  t2 PF
ENSTBEP00000001783 External link t2 SF
  t2 PF
ENSTBEP00000001759 External link t2 SF
  t2 PF
ENSTBEP00000002972 External link t2 SF
  t2 PF
ENSTBEP00000013318 External link t2 SF
  t2 PF
ENSTBEP00000003961 External link t2 SF
  t2 PF
ENSTBEP00000003557 External link t2 SF
  t2 PF
ENSTBEP00000008731 External link t2 SF
  t2 PF
ENSTBEP00000005765 External link t2 SF
  t2 PF
ENSTBEP00000012920 External link t2 SF
  t2 PF
ENSTBEP00000009522 External link t2 SF
  t2 PF
ENSTBEP00000008844 External link t2 SF
  t2 PF
ENSTBEP00000010023 External link t2 SF
  t2 PF
ENSTBEP00000014642 External link t2 SF
  t2 PF
ENSTBEP00000011407 External link t2 SF
  t2 PF
ENSTBEP00000012307 External link t2 SF
  t2 PF
ENSTBEP00000015396 External link t2 SF
  t2 PF
ENSTBEP00000002681 External link t2 SF
  t2 PF
ENSTBEP00000001635 External link t2 SF
  t2 PF
ENSTBEP00000013883 External link t2 SF
  t2 PF
ENSTBEP00000008760 External link t2 SF
  t2 PF
ENSTBEP00000013384 External link t2 SF
  t2 PF
ENSTBEP00000013385 External link t2 SF
  t2 PF
ENSTBEP00000012759 External link t2 SF
  t2 PF
ENSTBEP00000005040 External link t2 SF
  t2 PF
ENSTBEP00000004311 External link t2 SF
  t2 PF
ENSTBEP00000002112 External link t2 SF
  t2 PF
ENSTBEP00000006685 External link t2 SF
  t2 PF
ENSTBEP00000010507 External link t2 SF
  t2 PF
ENSTBEP00000000423 External link t2 SF
  t2 PF
ENSTBEP00000006060 External link t2 SF
  t2 PF
ENSTBEP00000010097 External link t2 SF
  t2 PF
ENSTBEP00000009744 External link t2 SF
  t2 PF
ENSTBEP00000005135 External link t2 SF
  t2 PF
ENSTBEP00000009217 External link t2 SF
  t2 PF
ENSTBEP00000005786 External link t2 SF
  t2 PF
ENSTBEP00000002654 External link t2 SF
  t2 PF
ENSTBEP00000007876 External link t2 SF
  t2 PF
ENSTBEP00000013623 External link t2 SF
  t2 PF
ENSTBEP00000014827 External link t2 SF
  t2 PF
ENSTBEP00000001365 External link t2 SF
  t2 PF
ENSTBEP00000003566 External link t2 SF
  t2 PF
ENSTBEP00000008328 External link t2 SF
  t2 PF
ENSTBEP00000015041 External link t2 SF
  t2 PF
ENSTBEP00000004914 External link t2 SF
  t2 PF
ENSTBEP00000010085 External link t2 SF
  t2 PF
ENSTBEP00000010823 External link t2 SF
  t2 PF
ENSTBEP00000011986 External link t2 SF
  t2 PF
ENSTBEP00000002747 External link t2 SF
  t2 PF