DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Pyrenophora tritici-repentis
Taxonomy: Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporaceae; Pyrenophora
source (downloaded: 2008-05-22)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
PTRG_08762 t4 SF
  t4 PF
PTRG_01118 t4 SF
  t4 PF
PTRG_09160 t4 SF
  t4 PF
PTRG_10061 t4 SF
  t4 PF No hits
PTRG_05029 t4 SF
  t4 PF
PTRG_00672 t4 SF
  t4 PF
PTRG_06164 t4 SF
  t4 PF
PTRG_03911 t4 SF
  t4 PF
PTRG_02671 t4 SF
  t4 PF No hits
PTRG_00822 t4 SF
  t4 PF
PTRG_00793 t4 SF
  t4 PF
PTRG_02094 t4 SF
  t4 PF
PTRG_01725 t4 SF
  t4 PF
PTRG_03860 t4 SF
  t4 PF
PTRG_03090 t4 SF
  t4 PF
PTRG_02851 t4 SF
  t4 PF
PTRG_11636 t4 SF
  t4 PF
PTRG_02013 t4 SF
  t4 PF No hits
PTRG_09921 t4 SF
  t4 PF
PTRG_02741 t4 SF
  t4 PF
PTRG_09422 t4 SF
  t4 PF
PTRG_10684 t4 SF
  t4 PF
PTRG_10356 t4 SF
  t4 PF
PTRG_00020 t4 SF
  t4 PF
PTRG_01524 t4 SF
  t4 PF
PTRG_06263 t4 SF
  t4 PF
PTRG_09307 t4 SF
  t4 PF
PTRG_01190 t4 SF
  t4 PF
PTRG_09927 t4 SF
  t4 PF
PTRG_04971 t4 SF
  t4 PF
PTRG_01780 t4 SF
  t4 PF
PTRG_10600 t4 SF
  t4 PF
PTRG_02086 t4 SF
  t4 PF
PTRG_10536 t4 SF
  t4 PF
PTRG_00667 t4 SF
  t4 PF
PTRG_02939 t4 SF
  t4 PF
PTRG_03145 t4 SF
  t4 PF
PTRG_02861 t4 SF
  t4 PF
PTRG_06182 t4 SF
  t4 PF
PTRG_02728 t4 SF
  t4 PF
PTRG_05430 t4 SF
  t4 PF
PTRG_00141 t4 SF
  t4 PF
PTRG_01922 t4 SF
  t4 PF
PTRG_08944 t4 SF
  t4 PF
PTRG_09831 t4 SF
  t4 PF
PTRG_05347 t4 SF
  t4 PF
PTRG_03263 t4 SF
  t4 PF
PTRG_11663 t4 SF
  t4 PF
PTRG_00360 t4 SF
  t4 PF
PTRG_04441 t4 SF
  t4 PF