DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Trypanosoma brucei
Taxonomy: Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma
source (downloaded: 2005-09-08)

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a detailed description.
The PFAM identifiers inside the boxes are also linked to detailed descriptions of the family.
The long family name can be viewed by holding the mouse over a colored rectangle.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The sequence ID links provide more detailed results for each predicted transcription factor.
External links are also provided, when available.
Common gene names are provided for the model organisms: Bacillus subtilis, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli, Homo sapiens, Mus musculus, Saccharomyces cerevisiae. and Salmonella typhimurium LT2.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
Tb927.6.4830/Tb06.30P15.660 External link tb SF
  tb PF
Tb11.01.8710 External link tb SF
  tb PF
Tb09.211.2400 External link tb SF
  tb PF
Tb09.160.1470 External link tb SF
  tb PF
Tb09.211.2260 External link tb SF
  tb PF
Tb927.1.4410 External link tb SF
  tb PF No hits
Tb11.02.5770 External link tb SF
  tb PF
Tb927.4.4520/Tb04.3I12.700 External link tb SF
  tb PF
Tb927.7.3810/Tb07.6C8.200 External link tb SF
  tb PF
Tb927.8.7820/Tb08.6H23.80 External link tb SF
  tb PF
Tb927.4.4570/Tb04.3I12.560 External link tb SF
  tb PF No hits
Tb10.61.1840 External link tb SF
  tb PF
Tb927.5.2060/Tb05.1P6.150 External link tb SF
  tb PF
Tb10.6k15.2730 External link tb SF
  tb PF
Tb10.70.6450 External link tb SF No hits
  tb PF
Tb927.7.2050/Tb07.43M14.490 External link tb SF No hits
  tb PF
Tb927.8.7790/Tb08.6H23.55 External link tb SF No hits
  tb PF
Tb927.8.620/Tb08.12O16.180 External link tb SF No hits
  tb PF
Tb927.4.4540/Tb04.3I12.630 External link tb SF No hits
  tb PF
Tb927.7.4330/Tb07.5F10.110 External link tb SF No hits
  tb PF
Tb09.160.3370 External link tb SF No hits
  tb PF
Tb11.01.8330 External link tb SF No hits
  tb PF
Tb927.6.1680/Tb06.28P18.530 External link tb SF No hits
  tb PF
Tb927.3.3740/Tb03.28C22.810 External link tb SF No hits
  tb PF
Tb927.6.3620/Tb06.4F7.940 External link tb SF No hits
  tb PF
Tb10.05.0060 External link tb SF No hits
  tb PF
Tb11.01.0220 External link tb SF No hits
  tb PF
Tb927.3.5640/Tb03.2H15.360 External link tb SF No hits
  tb PF
Tb927.7.4190/Tb07.5F10.350 External link tb SF No hits
  tb PF
Tb927.2.4420/30M24.370 External link tb SF No hits
  tb PF